Experiment: Sew9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02364 and OHPLBJKB_02365 are separated by 13 nucleotides OHPLBJKB_02365 and OHPLBJKB_02366 overlap by 4 nucleotides OHPLBJKB_02366 and OHPLBJKB_02367 overlap by 4 nucleotides
OHPLBJKB_02364: OHPLBJKB_02364 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 2,473,291 to 2,474,373
_02364
OHPLBJKB_02365: OHPLBJKB_02365 - Beta-phosphoglucomutase, at 2,474,387 to 2,475,046
_02365
OHPLBJKB_02366: OHPLBJKB_02366 - Kojibiose phosphorylase, at 2,475,043 to 2,477,310
_02366
OHPLBJKB_02367: OHPLBJKB_02367 - Myo-inositol 2-dehydrogenase, at 2,477,307 to 2,478,362
_02367
Position (kb)
2475
2476
2477
2478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2474.112 kb on - strand, within OHPLBJKB_02364 at 2474.120 kb on + strand, within OHPLBJKB_02364 at 2474.121 kb on - strand, within OHPLBJKB_02364 at 2474.140 kb on + strand, within OHPLBJKB_02364 at 2474.140 kb on + strand, within OHPLBJKB_02364 at 2474.141 kb on - strand, within OHPLBJKB_02364 at 2474.336 kb on + strand at 2474.349 kb on + strand at 2474.350 kb on - strand at 2474.390 kb on + strand at 2474.390 kb on + strand at 2474.391 kb on - strand at 2474.546 kb on - strand, within OHPLBJKB_02365 at 2474.618 kb on - strand, within OHPLBJKB_02365 at 2474.802 kb on + strand, within OHPLBJKB_02365 at 2474.802 kb on + strand, within OHPLBJKB_02365 at 2474.803 kb on - strand, within OHPLBJKB_02365 at 2475.008 kb on + strand at 2475.008 kb on + strand at 2475.008 kb on + strand at 2475.009 kb on - strand at 2475.009 kb on - strand at 2475.091 kb on - strand at 2475.132 kb on + strand at 2475.132 kb on + strand at 2475.133 kb on - strand at 2475.133 kb on - strand at 2475.133 kb on - strand at 2475.133 kb on - strand at 2475.375 kb on + strand, within OHPLBJKB_02366 at 2475.376 kb on - strand, within OHPLBJKB_02366 at 2475.376 kb on - strand, within OHPLBJKB_02366 at 2475.376 kb on - strand, within OHPLBJKB_02366 at 2475.478 kb on - strand, within OHPLBJKB_02366 at 2475.478 kb on - strand, within OHPLBJKB_02366 at 2475.482 kb on - strand, within OHPLBJKB_02366 at 2475.498 kb on + strand, within OHPLBJKB_02366 at 2475.566 kb on + strand, within OHPLBJKB_02366 at 2475.566 kb on + strand, within OHPLBJKB_02366 at 2475.566 kb on + strand, within OHPLBJKB_02366 at 2475.566 kb on + strand, within OHPLBJKB_02366 at 2475.567 kb on - strand, within OHPLBJKB_02366 at 2475.567 kb on - strand, within OHPLBJKB_02366 at 2475.567 kb on - strand, within OHPLBJKB_02366 at 2475.567 kb on - strand, within OHPLBJKB_02366 at 2475.567 kb on - strand, within OHPLBJKB_02366 at 2475.640 kb on + strand, within OHPLBJKB_02366 at 2475.641 kb on - strand, within OHPLBJKB_02366 at 2475.641 kb on - strand, within OHPLBJKB_02366 at 2475.751 kb on + strand, within OHPLBJKB_02366 at 2475.751 kb on + strand, within OHPLBJKB_02366 at 2475.751 kb on + strand, within OHPLBJKB_02366 at 2475.751 kb on + strand, within OHPLBJKB_02366 at 2475.752 kb on - strand, within OHPLBJKB_02366 at 2475.752 kb on - strand, within OHPLBJKB_02366 at 2475.752 kb on - strand, within OHPLBJKB_02366 at 2475.854 kb on + strand, within OHPLBJKB_02366 at 2475.854 kb on + strand, within OHPLBJKB_02366 at 2475.855 kb on - strand, within OHPLBJKB_02366 at 2475.855 kb on - strand, within OHPLBJKB_02366 at 2475.855 kb on - strand, within OHPLBJKB_02366 at 2475.855 kb on - strand, within OHPLBJKB_02366 at 2475.863 kb on + strand, within OHPLBJKB_02366 at 2475.863 kb on + strand, within OHPLBJKB_02366 at 2475.863 kb on + strand, within OHPLBJKB_02366 at 2475.863 kb on + strand, within OHPLBJKB_02366 at 2475.864 kb on - strand, within OHPLBJKB_02366 at 2475.864 kb on - strand, within OHPLBJKB_02366 at 2475.864 kb on - strand, within OHPLBJKB_02366 at 2475.870 kb on + strand, within OHPLBJKB_02366 at 2475.870 kb on + strand, within OHPLBJKB_02366 at 2475.873 kb on + strand, within OHPLBJKB_02366 at 2475.906 kb on + strand, within OHPLBJKB_02366 at 2476.300 kb on + strand, within OHPLBJKB_02366 at 2476.421 kb on - strand, within OHPLBJKB_02366 at 2476.521 kb on - strand, within OHPLBJKB_02366 at 2476.662 kb on + strand, within OHPLBJKB_02366 at 2476.662 kb on + strand, within OHPLBJKB_02366 at 2476.663 kb on - strand, within OHPLBJKB_02366 at 2476.663 kb on - strand, within OHPLBJKB_02366 at 2476.694 kb on + strand, within OHPLBJKB_02366 at 2476.694 kb on + strand, within OHPLBJKB_02366 at 2476.695 kb on - strand, within OHPLBJKB_02366 at 2476.695 kb on - strand, within OHPLBJKB_02366 at 2476.695 kb on - strand, within OHPLBJKB_02366 at 2476.722 kb on + strand, within OHPLBJKB_02366 at 2476.723 kb on - strand, within OHPLBJKB_02366 at 2476.769 kb on + strand, within OHPLBJKB_02366 at 2476.769 kb on + strand, within OHPLBJKB_02366 at 2476.769 kb on + strand, within OHPLBJKB_02366 at 2476.770 kb on - strand, within OHPLBJKB_02366 at 2476.899 kb on + strand, within OHPLBJKB_02366 at 2476.899 kb on + strand, within OHPLBJKB_02366 at 2476.899 kb on + strand, within OHPLBJKB_02366 at 2476.900 kb on - strand, within OHPLBJKB_02366 at 2476.967 kb on + strand, within OHPLBJKB_02366 at 2476.968 kb on - strand, within OHPLBJKB_02366 at 2477.077 kb on + strand, within OHPLBJKB_02366 at 2477.150 kb on + strand at 2477.165 kb on + strand at 2477.165 kb on + strand at 2477.165 kb on + strand at 2477.165 kb on + strand at 2477.166 kb on - strand at 2477.189 kb on + strand at 2477.190 kb on - strand at 2477.223 kb on - strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.252 kb on + strand at 2477.253 kb on - strand at 2477.253 kb on - strand at 2477.253 kb on - strand at 2477.253 kb on - strand at 2477.253 kb on - strand at 2477.253 kb on - strand at 2477.265 kb on + strand at 2477.265 kb on + strand at 2477.310 kb on + strand at 2477.311 kb on - strand at 2477.345 kb on - strand at 2477.374 kb on + strand at 2477.374 kb on + strand at 2477.375 kb on - strand at 2477.416 kb on - strand, within OHPLBJKB_02367 at 2477.416 kb on - strand, within OHPLBJKB_02367 at 2477.416 kb on - strand, within OHPLBJKB_02367 at 2477.490 kb on + strand, within OHPLBJKB_02367 at 2477.512 kb on + strand, within OHPLBJKB_02367 at 2477.512 kb on + strand, within OHPLBJKB_02367 at 2477.513 kb on - strand, within OHPLBJKB_02367 at 2477.516 kb on + strand, within OHPLBJKB_02367 at 2477.516 kb on + strand, within OHPLBJKB_02367 at 2477.516 kb on + strand, within OHPLBJKB_02367 at 2477.516 kb on + strand, within OHPLBJKB_02367 at 2477.516 kb on + strand, within OHPLBJKB_02367 at 2477.517 kb on - strand, within OHPLBJKB_02367 at 2477.517 kb on - strand, within OHPLBJKB_02367 at 2477.517 kb on - strand, within OHPLBJKB_02367 at 2477.671 kb on + strand, within OHPLBJKB_02367 at 2477.671 kb on + strand, within OHPLBJKB_02367 at 2477.671 kb on + strand, within OHPLBJKB_02367 at 2477.672 kb on - strand, within OHPLBJKB_02367 at 2477.672 kb on - strand, within OHPLBJKB_02367 at 2477.735 kb on + strand, within OHPLBJKB_02367 at 2477.776 kb on + strand, within OHPLBJKB_02367 at 2477.776 kb on + strand, within OHPLBJKB_02367 at 2477.776 kb on + strand, within OHPLBJKB_02367 at 2477.777 kb on - strand, within OHPLBJKB_02367 at 2477.777 kb on - strand, within OHPLBJKB_02367 at 2477.777 kb on - strand, within OHPLBJKB_02367 at 2477.795 kb on + strand, within OHPLBJKB_02367 at 2477.796 kb on - strand, within OHPLBJKB_02367 at 2477.796 kb on - strand, within OHPLBJKB_02367 at 2477.796 kb on - strand, within OHPLBJKB_02367 at 2477.902 kb on + strand, within OHPLBJKB_02367 at 2477.902 kb on + strand, within OHPLBJKB_02367 at 2477.902 kb on + strand, within OHPLBJKB_02367 at 2477.903 kb on - strand, within OHPLBJKB_02367 at 2477.903 kb on - strand, within OHPLBJKB_02367 at 2478.099 kb on - strand, within OHPLBJKB_02367 at 2478.120 kb on - strand, within OHPLBJKB_02367 at 2478.278 kb on - strand at 2478.280 kb on + strand at 2478.281 kb on - strand at 2478.281 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sew9 remove 2,474,112 - OHPLBJKB_02364 0.76 +0.2 2,474,120 + OHPLBJKB_02364 0.77 +0.1 2,474,121 - OHPLBJKB_02364 0.77 -0.3 2,474,140 + OHPLBJKB_02364 0.78 -0.2 2,474,140 + OHPLBJKB_02364 0.78 -0.8 2,474,141 - OHPLBJKB_02364 0.78 +0.1 2,474,336 + +0.7 2,474,349 + +0.1 2,474,350 - -0.5 2,474,390 + -0.6 2,474,390 + +0.9 2,474,391 - -0.3 2,474,546 - OHPLBJKB_02365 0.24 +0.3 2,474,618 - OHPLBJKB_02365 0.35 -1.1 2,474,802 + OHPLBJKB_02365 0.63 -0.9 2,474,802 + OHPLBJKB_02365 0.63 -0.5 2,474,803 - OHPLBJKB_02365 0.63 +0.0 2,475,008 + +0.6 2,475,008 + +1.0 2,475,008 + -1.3 2,475,009 - -1.4 2,475,009 - +0.6 2,475,091 - -0.9 2,475,132 + +1.0 2,475,132 + -0.7 2,475,133 - -0.3 2,475,133 - +1.5 2,475,133 - +0.7 2,475,133 - -0.9 2,475,375 + OHPLBJKB_02366 0.15 +0.1 2,475,376 - OHPLBJKB_02366 0.15 +2.2 2,475,376 - OHPLBJKB_02366 0.15 +1.1 2,475,376 - OHPLBJKB_02366 0.15 -0.4 2,475,478 - OHPLBJKB_02366 0.19 -1.7 2,475,478 - OHPLBJKB_02366 0.19 +0.1 2,475,482 - OHPLBJKB_02366 0.19 -1.1 2,475,498 + OHPLBJKB_02366 0.20 -0.7 2,475,566 + OHPLBJKB_02366 0.23 +1.1 2,475,566 + OHPLBJKB_02366 0.23 +0.7 2,475,566 + OHPLBJKB_02366 0.23 +0.5 2,475,566 + OHPLBJKB_02366 0.23 +0.3 2,475,567 - OHPLBJKB_02366 0.23 -0.9 2,475,567 - OHPLBJKB_02366 0.23 -1.3 2,475,567 - OHPLBJKB_02366 0.23 -0.7 2,475,567 - OHPLBJKB_02366 0.23 +1.5 2,475,567 - OHPLBJKB_02366 0.23 -0.3 2,475,640 + OHPLBJKB_02366 0.26 -1.1 2,475,641 - OHPLBJKB_02366 0.26 +0.6 2,475,641 - OHPLBJKB_02366 0.26 -0.2 2,475,751 + OHPLBJKB_02366 0.31 +0.9 2,475,751 + OHPLBJKB_02366 0.31 +0.3 2,475,751 + OHPLBJKB_02366 0.31 -0.6 2,475,751 + OHPLBJKB_02366 0.31 +0.8 2,475,752 - OHPLBJKB_02366 0.31 -1.8 2,475,752 - OHPLBJKB_02366 0.31 +0.1 2,475,752 - OHPLBJKB_02366 0.31 -1.3 2,475,854 + OHPLBJKB_02366 0.36 -0.2 2,475,854 + OHPLBJKB_02366 0.36 -1.3 2,475,855 - OHPLBJKB_02366 0.36 +0.7 2,475,855 - OHPLBJKB_02366 0.36 +0.2 2,475,855 - OHPLBJKB_02366 0.36 +0.1 2,475,855 - OHPLBJKB_02366 0.36 -0.0 2,475,863 + OHPLBJKB_02366 0.36 -0.5 2,475,863 + OHPLBJKB_02366 0.36 +0.2 2,475,863 + OHPLBJKB_02366 0.36 +0.2 2,475,863 + OHPLBJKB_02366 0.36 -2.3 2,475,864 - OHPLBJKB_02366 0.36 +0.7 2,475,864 - OHPLBJKB_02366 0.36 +0.6 2,475,864 - OHPLBJKB_02366 0.36 +2.0 2,475,870 + OHPLBJKB_02366 0.36 +0.1 2,475,870 + OHPLBJKB_02366 0.36 -1.7 2,475,873 + OHPLBJKB_02366 0.37 -1.2 2,475,906 + OHPLBJKB_02366 0.38 +1.1 2,476,300 + OHPLBJKB_02366 0.55 +1.2 2,476,421 - OHPLBJKB_02366 0.61 +0.9 2,476,521 - OHPLBJKB_02366 0.65 -0.1 2,476,662 + OHPLBJKB_02366 0.71 -0.1 2,476,662 + OHPLBJKB_02366 0.71 -0.2 2,476,663 - OHPLBJKB_02366 0.71 -1.3 2,476,663 - OHPLBJKB_02366 0.71 +0.7 2,476,694 + OHPLBJKB_02366 0.73 +0.8 2,476,694 + OHPLBJKB_02366 0.73 +0.3 2,476,695 - OHPLBJKB_02366 0.73 +1.1 2,476,695 - OHPLBJKB_02366 0.73 +0.2 2,476,695 - OHPLBJKB_02366 0.73 +0.1 2,476,722 + OHPLBJKB_02366 0.74 -0.9 2,476,723 - OHPLBJKB_02366 0.74 -0.7 2,476,769 + OHPLBJKB_02366 0.76 -0.5 2,476,769 + OHPLBJKB_02366 0.76 +0.6 2,476,769 + OHPLBJKB_02366 0.76 -0.3 2,476,770 - OHPLBJKB_02366 0.76 +0.5 2,476,899 + OHPLBJKB_02366 0.82 -1.0 2,476,899 + OHPLBJKB_02366 0.82 -0.5 2,476,899 + OHPLBJKB_02366 0.82 +0.8 2,476,900 - OHPLBJKB_02366 0.82 +0.4 2,476,967 + OHPLBJKB_02366 0.85 +0.4 2,476,968 - OHPLBJKB_02366 0.85 +0.1 2,477,077 + OHPLBJKB_02366 0.90 +0.1 2,477,150 + +0.4 2,477,165 + +0.5 2,477,165 + -0.5 2,477,165 + +0.1 2,477,165 + +0.6 2,477,166 - +0.7 2,477,189 + -1.5 2,477,190 - -0.1 2,477,223 - +0.7 2,477,252 + -1.2 2,477,252 + +2.5 2,477,252 + +0.6 2,477,252 + -0.7 2,477,252 + +0.2 2,477,252 + +0.6 2,477,252 + -0.9 2,477,252 + +1.3 2,477,252 + -0.0 2,477,252 + +0.7 2,477,252 + -1.1 2,477,253 - -1.0 2,477,253 - -0.5 2,477,253 - -0.4 2,477,253 - +0.8 2,477,253 - +0.3 2,477,253 - +0.2 2,477,265 + +0.6 2,477,265 + -2.5 2,477,310 + +0.5 2,477,311 - +1.1 2,477,345 - -1.9 2,477,374 + -0.3 2,477,374 + +0.9 2,477,375 - +0.3 2,477,416 - OHPLBJKB_02367 0.10 +0.7 2,477,416 - OHPLBJKB_02367 0.10 +1.1 2,477,416 - OHPLBJKB_02367 0.10 +1.1 2,477,490 + OHPLBJKB_02367 0.17 +0.3 2,477,512 + OHPLBJKB_02367 0.19 -0.9 2,477,512 + OHPLBJKB_02367 0.19 -0.1 2,477,513 - OHPLBJKB_02367 0.20 +0.9 2,477,516 + OHPLBJKB_02367 0.20 -0.1 2,477,516 + OHPLBJKB_02367 0.20 -1.9 2,477,516 + OHPLBJKB_02367 0.20 +1.2 2,477,516 + OHPLBJKB_02367 0.20 +0.8 2,477,516 + OHPLBJKB_02367 0.20 +0.2 2,477,517 - OHPLBJKB_02367 0.20 +0.2 2,477,517 - OHPLBJKB_02367 0.20 -0.3 2,477,517 - OHPLBJKB_02367 0.20 +0.3 2,477,671 + OHPLBJKB_02367 0.34 +0.8 2,477,671 + OHPLBJKB_02367 0.34 -0.5 2,477,671 + OHPLBJKB_02367 0.34 -0.1 2,477,672 - OHPLBJKB_02367 0.35 -0.7 2,477,672 - OHPLBJKB_02367 0.35 -0.1 2,477,735 + OHPLBJKB_02367 0.41 +0.1 2,477,776 + OHPLBJKB_02367 0.44 -0.4 2,477,776 + OHPLBJKB_02367 0.44 -1.1 2,477,776 + OHPLBJKB_02367 0.44 -0.2 2,477,777 - OHPLBJKB_02367 0.45 +0.7 2,477,777 - OHPLBJKB_02367 0.45 +0.5 2,477,777 - OHPLBJKB_02367 0.45 +0.1 2,477,795 + OHPLBJKB_02367 0.46 +0.5 2,477,796 - OHPLBJKB_02367 0.46 +0.1 2,477,796 - OHPLBJKB_02367 0.46 -0.0 2,477,796 - OHPLBJKB_02367 0.46 -0.5 2,477,902 + OHPLBJKB_02367 0.56 +1.1 2,477,902 + OHPLBJKB_02367 0.56 +1.0 2,477,902 + OHPLBJKB_02367 0.56 -0.4 2,477,903 - OHPLBJKB_02367 0.56 -1.6 2,477,903 - OHPLBJKB_02367 0.56 -0.2 2,478,099 - OHPLBJKB_02367 0.75 +0.3 2,478,120 - OHPLBJKB_02367 0.77 +0.4 2,478,278 - -0.2 2,478,280 + +1.8 2,478,281 - -0.3 2,478,281 - +0.7
Or see this region's nucleotide sequence