Strain Fitness in Erwinia amylovora T8 around OLJFJH_11175

Experiment: Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-1
2,324,258	-		OLJFJH_11165	0.61	-0.0
2,324,290	-		OLJFJH_11165	0.65	-0.4
2,324,361	+		OLJFJH_11165	0.74	-0.7
2,324,454	+		OLJFJH_11165	0.86	-0.0
2,324,488	-		OLJFJH_11165	0.90	+0.6
2,324,488	-		OLJFJH_11165	0.90	+0.6
2,324,522	-				-0.4
2,324,590	+				+0.2
2,324,590	+				-0.2
2,324,657	+				-0.2
2,324,676	+				-0.8
2,324,760	+		OLJFJH_11170	0.19	-0.2
2,324,760	+		OLJFJH_11170	0.19	-0.3
2,324,761	-		OLJFJH_11170	0.19	+0.1
2,324,761	-		OLJFJH_11170	0.19	-1.5
2,324,814	+		OLJFJH_11170	0.28	+0.3
2,324,817	+		OLJFJH_11170	0.29	-0.3
2,324,818	-		OLJFJH_11170	0.29	-0.4
2,324,839	+		OLJFJH_11170	0.33	+1.5
2,325,010	+		OLJFJH_11170	0.64	+0.2
2,325,010	+		OLJFJH_11170	0.64	-0.4
2,325,011	-		OLJFJH_11170	0.64	-0.2
2,325,011	-		OLJFJH_11170	0.64	-0.3
2,325,011	-		OLJFJH_11170	0.64	+0.5
2,325,072	+		OLJFJH_11170	0.75	-0.6
2,325,073	-		OLJFJH_11170	0.76	-0.6
2,325,091	-		OLJFJH_11170	0.79	-0.8
2,325,091	-		OLJFJH_11170	0.79	+0.2
2,325,205	-				-0.4
2,325,238	-				-1.1
2,325,325	+		OLJFJH_11175	0.31	-1.0
2,325,341	+		OLJFJH_11175	0.37	-0.2
2,325,381	+		OLJFJH_11175	0.51	-0.5
2,325,517	+				-0.2
2,325,518	-				+0.5
2,325,518	-				+1.1
2,325,518	-				+0.1
2,325,664	+				+0.9
2,325,664	+				-0.0
2,325,664	+				-0.0
2,325,815	+				+0.4
2,325,815	+				-0.2
2,325,815	+				+0.1
2,325,816	-				+0.1
2,325,827	+				-0.3
2,325,827	+				+0.2
2,325,827	+				+0.8
2,325,828	-				+0.5
2,325,828	-				-0.2
2,325,828	-				+0.0
2,325,829	+				+0.1
2,325,894	-		OLJFJH_11180	0.13	-0.5
2,325,936	+		OLJFJH_11180	0.15	-0.6
2,325,937	-		OLJFJH_11180	0.15	-0.5
2,326,140	-		OLJFJH_11180	0.25	-0.2
2,326,272	+		OLJFJH_11180	0.31	-0.5
2,326,272	+		OLJFJH_11180	0.31	+0.1
2,326,272	+		OLJFJH_11180	0.31	+0.4
2,326,272	+		OLJFJH_11180	0.31	+0.3
2,326,273	-		OLJFJH_11180	0.32	-0.3
2,326,273	-		OLJFJH_11180	0.32	+0.2
2,326,275	+		OLJFJH_11180	0.32	+0.2
2,326,276	-		OLJFJH_11180	0.32	+0.2
2,326,447	-		OLJFJH_11180	0.40	-0.4
2,326,447	-		OLJFJH_11180	0.40	-0.0