Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_15935 and OLJFJH_15940 are separated by 89 nucleotides OLJFJH_15940 and OLJFJH_15945 are separated by 112 nucleotides OLJFJH_15945 and OLJFJH_15950 are separated by 69 nucleotides
OLJFJH_15935: OLJFJH_15935 - porin OmpA, at 3,353,123 to 3,354,190
_15935
OLJFJH_15940: OLJFJH_15940 - macrodomain Ter protein MatP, at 3,354,280 to 3,354,732
_15940
OLJFJH_15945: OLJFJH_15945 - Lon protease, at 3,354,845 to 3,356,680
_15945
OLJFJH_15950: OLJFJH_15950 - bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase, at 3,356,750 to 3,357,268
_15950
Position (kb)
3354
3355
3356
3357 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3354.188 kb on + strand at 3354.188 kb on + strand at 3354.188 kb on + strand at 3354.244 kb on - strand at 3354.252 kb on + strand at 3354.338 kb on + strand, within OLJFJH_15940 at 3354.338 kb on + strand, within OLJFJH_15940 at 3354.339 kb on - strand, within OLJFJH_15940 at 3354.393 kb on + strand, within OLJFJH_15940 at 3354.393 kb on + strand, within OLJFJH_15940 at 3354.393 kb on + strand, within OLJFJH_15940 at 3354.394 kb on - strand, within OLJFJH_15940 at 3354.394 kb on - strand, within OLJFJH_15940 at 3354.394 kb on - strand, within OLJFJH_15940 at 3354.441 kb on - strand, within OLJFJH_15940 at 3354.498 kb on + strand, within OLJFJH_15940 at 3354.549 kb on + strand, within OLJFJH_15940 at 3354.641 kb on + strand, within OLJFJH_15940 at 3354.642 kb on - strand, within OLJFJH_15940 at 3354.683 kb on + strand, within OLJFJH_15940 at 3354.683 kb on + strand, within OLJFJH_15940 at 3354.726 kb on - strand at 3354.751 kb on - strand at 3354.753 kb on - strand at 3354.753 kb on - strand at 3354.819 kb on + strand at 3354.877 kb on + strand at 3355.536 kb on + strand, within OLJFJH_15945 at 3355.536 kb on + strand, within OLJFJH_15945 at 3355.540 kb on + strand, within OLJFJH_15945 at 3355.607 kb on + strand, within OLJFJH_15945 at 3355.607 kb on + strand, within OLJFJH_15945 at 3355.607 kb on + strand, within OLJFJH_15945 at 3355.627 kb on + strand, within OLJFJH_15945 at 3355.627 kb on + strand, within OLJFJH_15945 at 3355.797 kb on + strand, within OLJFJH_15945 at 3356.263 kb on + strand, within OLJFJH_15945 at 3356.398 kb on + strand, within OLJFJH_15945 at 3356.398 kb on + strand, within OLJFJH_15945 at 3356.491 kb on + strand, within OLJFJH_15945 at 3356.590 kb on + strand at 3356.592 kb on + strand at 3356.614 kb on + strand at 3357.531 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 3,354,188 + -0.8 3,354,188 + +0.1 3,354,188 + -0.6 3,354,244 - -2.1 3,354,252 + -1.7 3,354,338 + OLJFJH_15940 0.13 -0.1 3,354,338 + OLJFJH_15940 0.13 -0.2 3,354,339 - OLJFJH_15940 0.13 +0.2 3,354,393 + OLJFJH_15940 0.25 -0.6 3,354,393 + OLJFJH_15940 0.25 +0.7 3,354,393 + OLJFJH_15940 0.25 -2.8 3,354,394 - OLJFJH_15940 0.25 -0.9 3,354,394 - OLJFJH_15940 0.25 +1.3 3,354,394 - OLJFJH_15940 0.25 -0.1 3,354,441 - OLJFJH_15940 0.36 -2.3 3,354,498 + OLJFJH_15940 0.48 +1.0 3,354,549 + OLJFJH_15940 0.59 +0.4 3,354,641 + OLJFJH_15940 0.80 +0.2 3,354,642 - OLJFJH_15940 0.80 -0.0 3,354,683 + OLJFJH_15940 0.89 -0.4 3,354,683 + OLJFJH_15940 0.89 +0.3 3,354,726 - -1.0 3,354,751 - +0.9 3,354,753 - -0.3 3,354,753 - +0.5 3,354,819 + +0.6 3,354,877 + -3.5 3,355,536 + OLJFJH_15945 0.38 +0.0 3,355,536 + OLJFJH_15945 0.38 -2.4 3,355,540 + OLJFJH_15945 0.38 -3.5 3,355,607 + OLJFJH_15945 0.42 -0.6 3,355,607 + OLJFJH_15945 0.42 +0.4 3,355,607 + OLJFJH_15945 0.42 -0.4 3,355,627 + OLJFJH_15945 0.43 -1.8 3,355,627 + OLJFJH_15945 0.43 -1.1 3,355,797 + OLJFJH_15945 0.52 -1.4 3,356,263 + OLJFJH_15945 0.77 -2.0 3,356,398 + OLJFJH_15945 0.85 -1.2 3,356,398 + OLJFJH_15945 0.85 -2.1 3,356,491 + OLJFJH_15945 0.90 -1.2 3,356,590 + -0.9 3,356,592 + -0.2 3,356,614 + -1.2 3,357,531 - -0.3
Or see this region's nucleotide sequence