Strain Fitness in Erwinia amylovora T8 around OLJFJH_15100
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 |
---|---|---|---|---|---|
remove | |||||
3,186,342 | + | OLJFJH_15090 | 0.84 | +1.7 | |
3,186,578 | - | +0.6 | |||
3,186,748 | + | +0.8 | |||
3,186,769 | + | -0.2 | |||
3,186,787 | - | -0.3 | |||
3,186,808 | - | +0.7 | |||
3,186,809 | + | +1.4 | |||
3,187,016 | - | +0.2 | |||
3,187,155 | + | +1.0 | |||
3,187,168 | + | +1.9 | |||
3,187,215 | + | -0.0 | |||
3,187,412 | + | OLJFJH_15100 | 0.41 | -1.5 | |
3,187,847 | + | +0.9 | |||
3,188,089 | + | -0.6 | |||
3,188,116 | - | +1.3 | |||
3,188,116 | - | +0.5 | |||
3,188,311 | + | -1.0 | |||
3,188,462 | - | -0.4 | |||
3,188,631 | - | +0.9 | |||
3,188,727 | - | -0.0 |
Or see this region's nucleotide sequence