Strain Fitness in Erwinia amylovora T8 around OLJFJH_12050
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 |
---|---|---|---|---|---|
remove | |||||
2,534,670 | + | OLJFJH_12045 | 0.58 | -0.6 | |
2,534,675 | - | OLJFJH_12045 | 0.59 | -0.8 | |
2,534,747 | + | OLJFJH_12045 | 0.65 | +0.2 | |
2,534,834 | + | OLJFJH_12045 | 0.73 | +0.1 | |
2,535,037 | + | -0.1 | |||
2,535,060 | - | -0.7 | |||
2,535,136 | + | +2.0 | |||
2,535,276 | + | +1.4 | |||
2,535,565 | + | OLJFJH_12050 | 0.24 | -0.5 | |
2,535,748 | + | OLJFJH_12050 | 0.42 | -2.3 | |
2,535,884 | + | OLJFJH_12050 | 0.55 | -2.0 | |
2,535,952 | + | OLJFJH_12050 | 0.61 | -3.8 | |
2,536,058 | + | OLJFJH_12050 | 0.71 | -0.7 | |
2,536,361 | + | +1.0 | |||
2,536,596 | + | OLJFJH_12055 | 0.27 | +1.5 | |
2,536,655 | - | OLJFJH_12055 | 0.35 | +2.5 | |
2,536,835 | - | OLJFJH_12055 | 0.57 | -0.3 | |
2,536,896 | - | OLJFJH_12055 | 0.65 | +1.2 | |
2,536,999 | - | OLJFJH_12055 | 0.78 | -0.6 | |
2,537,058 | + | OLJFJH_12055 | 0.85 | +0.5 |
Or see this region's nucleotide sequence