Strain Fitness in Erwinia amylovora T8 around OLJFJH_11925

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
2,499,897	+				-1.0
2,499,897	+				-0.0
2,499,897	+				-2.1
2,499,902	-				+1.4
2,500,115	-				-0.2
2,500,129	+				+0.5
2,500,208	+				-0.4
2,500,217	+				-1.6
2,500,287	-				+0.2
2,500,287	-				-0.4
2,500,287	-				-0.9
2,500,292	+				+0.2
2,500,301	-				+0.6
2,500,314	+		OLJFJH_11920	0.10	+4.4
2,500,501	-				-1.8
2,500,552	+				+0.2
2,500,552	+				+0.1
2,500,553	-				+2.0
2,500,553	-				-1.0
2,500,559	+				-0.1
2,500,664	+				+0.8
2,500,752	-				-0.8
2,500,755	-				-0.4
2,501,293	+		OLJFJH_11925	0.53	-1.0
2,501,449	-		OLJFJH_11925	0.71	-1.2
2,501,694	+				-0.7
2,501,695	-				+0.9
2,501,695	-				-2.4
2,501,695	-				+1.1
2,501,832	-		OLJFJH_11930	0.18	-0.3
2,501,832	-		OLJFJH_11930	0.18	-0.7
2,501,832	-		OLJFJH_11930	0.18	-0.5
2,502,122	+		OLJFJH_11930	0.54	+0.0
2,502,126	+		OLJFJH_11930	0.55	+0.1
2,502,127	-		OLJFJH_11930	0.55	-1.4
2,502,306	+		OLJFJH_11930	0.77	+0.1
2,502,367	-		OLJFJH_11930	0.85	-2.0
2,502,378	+		OLJFJH_11930	0.86	-0.7
2,502,473	-				-0.3
2,502,485	-				-0.0
2,502,595	+				+0.0
2,502,595	+				+0.9
2,502,597	+				+0.2
2,502,597	+				+0.1
2,502,597	+				-1.0
2,502,598	-				+2.8
2,502,598	-				+0.2
2,502,598	-				+1.1
2,502,621	+				+0.3