Strain Fitness in Erwinia amylovora T8 around OLJFJH_11710

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
2,451,837	+		OLJFJH_11705	0.55	+0.7
2,451,902	+		OLJFJH_11705	0.59	+0.4
2,451,902	+		OLJFJH_11705	0.59	-1.8
2,451,902	+		OLJFJH_11705	0.59	-1.7
2,451,903	-		OLJFJH_11705	0.59	-0.2
2,451,911	+		OLJFJH_11705	0.59	+2.1
2,451,912	-		OLJFJH_11705	0.59	+0.4
2,451,912	-		OLJFJH_11705	0.59	-0.5
2,451,915	-		OLJFJH_11705	0.60	-2.0
2,451,915	-		OLJFJH_11705	0.60	+0.7
2,451,997	+		OLJFJH_11705	0.64	-0.1
2,452,055	+		OLJFJH_11705	0.68	+0.1
2,452,055	+		OLJFJH_11705	0.68	-3.3
2,452,055	+		OLJFJH_11705	0.68	+0.3
2,452,056	-		OLJFJH_11705	0.68	-0.8
2,452,056	-		OLJFJH_11705	0.68	-0.8
2,452,056	-		OLJFJH_11705	0.68	+0.9
2,452,057	+		OLJFJH_11705	0.68	-0.4
2,452,057	+		OLJFJH_11705	0.68	-1.8
2,452,058	-		OLJFJH_11705	0.68	-0.1
2,452,118	+		OLJFJH_11705	0.71	+0.9
2,452,119	-		OLJFJH_11705	0.71	-0.4
2,452,127	-		OLJFJH_11705	0.72	-0.1
2,452,139	-		OLJFJH_11705	0.72	+0.4
2,452,204	+		OLJFJH_11705	0.76	+0.1
2,452,204	+		OLJFJH_11705	0.76	-3.1
2,452,205	-		OLJFJH_11705	0.76	-0.0
2,452,345	-		OLJFJH_11705	0.84	+1.4
2,452,417	+		OLJFJH_11705	0.88	-0.3
2,452,417	+		OLJFJH_11705	0.88	+1.4
2,452,417	+		OLJFJH_11705	0.88	+2.0
2,452,646	+				-0.1
2,452,651	+				+0.6
2,452,651	+				-2.3
2,452,652	-				+0.7
2,452,652	-				-1.0
2,452,652	-				-1.9
2,452,652	-				-0.4
2,452,652	-				+1.2
2,452,654	+				-0.6
2,452,654	+				-1.0
2,452,654	+				-0.4
2,452,655	-				-2.1
2,452,713	+				-2.4
2,452,713	+				-1.4
2,452,714	-				-0.5
2,452,716	+				+0.7
2,452,763	-				+3.7
2,452,808	-				+0.0
2,452,820	+				-0.6
2,452,821	-				-1.8
2,452,826	+				-0.3
2,452,873	+				+0.1
2,452,873	+				+0.4
2,452,874	-				-3.4
2,452,931	-		OLJFJH_11710	0.17	+0.3
2,452,931	-		OLJFJH_11710	0.17	-0.1
2,452,948	+		OLJFJH_11710	0.20	-0.2
2,452,953	+		OLJFJH_11710	0.20	-0.0
2,452,954	-		OLJFJH_11710	0.21	+0.2
2,452,954	-		OLJFJH_11710	0.21	-1.0
2,452,992	+		OLJFJH_11710	0.26	-0.1
2,452,993	-		OLJFJH_11710	0.26	-1.4
2,453,020	-		OLJFJH_11710	0.30	-0.6
2,453,056	+		OLJFJH_11710	0.35	+0.1
2,453,057	-		OLJFJH_11710	0.35	+0.4
2,453,057	-		OLJFJH_11710	0.35	-1.5
2,453,057	-		OLJFJH_11710	0.35	+1.9
2,453,061	+		OLJFJH_11710	0.36	+0.8
2,453,061	+		OLJFJH_11710	0.36	+0.1
2,453,061	+		OLJFJH_11710	0.36	-0.4
2,453,061	+		OLJFJH_11710	0.36	+0.1
2,453,062	-		OLJFJH_11710	0.36	-1.7
2,453,169	-		OLJFJH_11710	0.51	-0.1
2,453,171	+		OLJFJH_11710	0.51	+0.6
2,453,203	-		OLJFJH_11710	0.56	+0.8
2,453,373	-		OLJFJH_11710	0.80	-0.1
2,453,373	-		OLJFJH_11710	0.80	-0.1
2,453,373	-		OLJFJH_11710	0.80	-0.6
2,453,390	+		OLJFJH_11710	0.82	+0.1
2,453,605	+				+0.5
2,453,624	+				+0.9
2,453,624	+				-0.2
2,453,625	-				+2.2
2,453,628	+				+1.5
2,453,628	+				-0.3
2,453,628	+				+0.4
2,453,628	+				-0.1
2,453,628	+				-0.1
2,453,629	-				-0.4
2,453,629	-				+0.2
2,453,629	-				+0.0
2,453,629	-				+1.3
2,453,629	-				-0.3
2,453,703	+		OLJFJH_11715	0.13	-0.4
2,453,704	-		OLJFJH_11715	0.13	+0.3
2,453,704	-		OLJFJH_11715	0.13	-1.9
2,453,704	-		OLJFJH_11715	0.13	-0.7
2,453,704	-		OLJFJH_11715	0.13	+0.4
2,453,736	+		OLJFJH_11715	0.16	-2.5
2,453,737	-		OLJFJH_11715	0.16	+0.8
2,453,786	+		OLJFJH_11715	0.20	+2.3
2,453,787	-		OLJFJH_11715	0.20	+0.4
2,453,846	+		OLJFJH_11715	0.25	+0.7
2,453,846	+		OLJFJH_11715	0.25	+1.0
2,453,847	-		OLJFJH_11715	0.25	-0.1
2,453,850	+		OLJFJH_11715	0.26	+0.8
2,453,850	+		OLJFJH_11715	0.26	+0.0
2,453,851	-		OLJFJH_11715	0.26	-0.4
2,453,851	-		OLJFJH_11715	0.26	+0.8
2,453,851	-		OLJFJH_11715	0.26	+1.0
2,453,852	+		OLJFJH_11715	0.26	-0.2
2,453,854	+		OLJFJH_11715	0.26	-1.0
2,453,854	+		OLJFJH_11715	0.26	+0.9
2,453,922	+		OLJFJH_11715	0.32	-0.4
2,454,188	-		OLJFJH_11715	0.54	-2.7
2,454,195	+		OLJFJH_11715	0.54	+0.5
2,454,195	+		OLJFJH_11715	0.54	-1.8
2,454,239	+		OLJFJH_11715	0.58	-1.1
2,454,261	+		OLJFJH_11715	0.60	+1.2
2,454,262	-		OLJFJH_11715	0.60	+1.1
2,454,303	+		OLJFJH_11715	0.63	+0.5
2,454,304	-		OLJFJH_11715	0.63	-0.2
2,454,323	-		OLJFJH_11715	0.65	+0.9
2,454,406	+		OLJFJH_11715	0.72	-2.4
2,454,425	-		OLJFJH_11715	0.73	-0.6