Strain Fitness in Erwinia amylovora T8 around OLJFJH_11230

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
2,334,876	-				-0.5
2,334,877	+				+1.2
2,334,877	+				+0.2
2,334,878	-				-0.4
2,334,943	-				-0.3
2,334,943	-				-0.6
2,335,166	+		OLJFJH_11225	0.29	+2.3
2,335,166	+		OLJFJH_11225	0.29	-2.3
2,335,167	-		OLJFJH_11225	0.29	-0.2
2,335,167	-		OLJFJH_11225	0.29	-0.6
2,335,167	-		OLJFJH_11225	0.29	-0.3
2,335,175	-		OLJFJH_11225	0.30	-0.6
2,335,214	+		OLJFJH_11225	0.35	+0.3
2,335,330	-		OLJFJH_11225	0.50	+1.3
2,335,385	+		OLJFJH_11225	0.57	+1.4
2,335,386	-		OLJFJH_11225	0.57	-0.1
2,335,426	-		OLJFJH_11225	0.62	-2.3
2,335,501	+		OLJFJH_11225	0.71	-2.2
2,335,828	+				-0.3
2,335,851	-				-2.1
2,335,851	-				+0.3
2,335,851	-				-1.2
2,336,161	+		OLJFJH_11230	0.26	-1.8
2,336,161	+		OLJFJH_11230	0.26	-3.1
2,336,162	-		OLJFJH_11230	0.26	-1.0
2,336,229	+		OLJFJH_11230	0.32	-1.9
2,336,431	-		OLJFJH_11230	0.49	-1.3
2,336,720	+		OLJFJH_11230	0.75	-1.7
2,336,818	+		OLJFJH_11230	0.84	-0.4
2,336,818	+		OLJFJH_11230	0.84	+0.4
2,336,818	+		OLJFJH_11230	0.84	-2.8
2,336,819	-		OLJFJH_11230	0.84	-1.4
2,337,107	-				-1.8
2,337,143	+				+1.1
2,337,162	-				-1.9
2,337,858	+		OLJFJH_11235	0.73	-0.4
2,337,859	-		OLJFJH_11235	0.74	-1.1
2,337,942	+		OLJFJH_11235	0.82	+0.8