Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_10455 and OLJFJH_10460 are separated by 37 nucleotides OLJFJH_10460 and OLJFJH_10465 are separated by 128 nucleotides OLJFJH_10465 and OLJFJH_10470 are separated by 212 nucleotides
OLJFJH_10455: OLJFJH_10455 - histidine--tRNA ligase, at 2,156,891 to 2,158,168
_10455
OLJFJH_10460: OLJFJH_10460 - Ancillary SecYEG translocon subunit, at 2,158,206 to 2,158,826
_10460
OLJFJH_10465: OLJFJH_10465 - outer membrane protein assembly factor BamB, at 2,158,955 to 2,160,136
_10465
OLJFJH_10470: OLJFJH_10470 - ribosome biogenesis GTPase Der, at 2,160,349 to 2,161,848
_10470
Position (kb)
2158
2159
2160
2161 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2158.099 kb on + strand at 2158.158 kb on + strand at 2158.190 kb on - strand at 2158.200 kb on + strand at 2158.200 kb on + strand at 2158.201 kb on - strand at 2158.215 kb on + strand at 2158.216 kb on - strand at 2158.312 kb on + strand, within OLJFJH_10460 at 2158.457 kb on + strand, within OLJFJH_10460 at 2158.497 kb on + strand, within OLJFJH_10460 at 2158.497 kb on + strand, within OLJFJH_10460 at 2158.500 kb on - strand, within OLJFJH_10460 at 2158.537 kb on + strand, within OLJFJH_10460 at 2158.827 kb on + strand at 2158.827 kb on + strand at 2158.828 kb on - strand at 2158.828 kb on - strand at 2158.834 kb on - strand at 2158.878 kb on - strand at 2158.878 kb on - strand at 2158.878 kb on - strand at 2158.878 kb on - strand at 2158.913 kb on + strand at 2159.523 kb on + strand, within OLJFJH_10465 at 2159.523 kb on + strand, within OLJFJH_10465 at 2159.523 kb on + strand, within OLJFJH_10465 at 2159.524 kb on - strand, within OLJFJH_10465 at 2159.635 kb on + strand, within OLJFJH_10465 at 2159.651 kb on - strand, within OLJFJH_10465 at 2159.744 kb on + strand, within OLJFJH_10465 at 2159.954 kb on + strand, within OLJFJH_10465 at 2159.954 kb on + strand, within OLJFJH_10465 at 2159.954 kb on + strand, within OLJFJH_10465 at 2159.954 kb on + strand, within OLJFJH_10465 at 2159.955 kb on - strand, within OLJFJH_10465 at 2160.127 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 2,158,099 + -0.1 2,158,158 + -0.3 2,158,190 - -0.1 2,158,200 + +0.2 2,158,200 + +0.4 2,158,201 - -0.4 2,158,215 + +0.9 2,158,216 - -0.8 2,158,312 + OLJFJH_10460 0.17 -0.8 2,158,457 + OLJFJH_10460 0.40 +0.5 2,158,497 + OLJFJH_10460 0.47 -0.4 2,158,497 + OLJFJH_10460 0.47 +0.3 2,158,500 - OLJFJH_10460 0.47 +0.2 2,158,537 + OLJFJH_10460 0.53 +0.1 2,158,827 + +0.5 2,158,827 + -0.3 2,158,828 - +0.2 2,158,828 - -0.4 2,158,834 - -0.8 2,158,878 - -0.6 2,158,878 - -0.1 2,158,878 - +0.2 2,158,878 - -0.1 2,158,913 + +0.0 2,159,523 + OLJFJH_10465 0.48 -2.4 2,159,523 + OLJFJH_10465 0.48 +1.4 2,159,523 + OLJFJH_10465 0.48 -0.1 2,159,524 - OLJFJH_10465 0.48 +0.2 2,159,635 + OLJFJH_10465 0.58 -0.4 2,159,651 - OLJFJH_10465 0.59 -1.0 2,159,744 + OLJFJH_10465 0.67 -0.4 2,159,954 + OLJFJH_10465 0.85 -0.8 2,159,954 + OLJFJH_10465 0.85 -0.4 2,159,954 + OLJFJH_10465 0.85 +0.2 2,159,954 + OLJFJH_10465 0.85 +0.2 2,159,955 - OLJFJH_10465 0.85 -0.1 2,160,127 + +2.5
Or see this region's nucleotide sequence