Strain Fitness in Erwinia amylovora T8 around OLJFJH_07540

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,537,257	+		OLJFJH_07525	0.86	+0.9
1,537,257	+		OLJFJH_07525	0.86	+1.1
1,537,302	+				-0.5
1,537,303	-				-0.2
1,537,303	-				+0.6
1,537,344	-		OLJFJH_07530	0.18	+0.5
1,537,361	+		OLJFJH_07530	0.24	-0.6
1,537,361	+		OLJFJH_07530	0.24	+1.3
1,537,386	+		OLJFJH_07530	0.33	+1.0
1,537,387	-		OLJFJH_07530	0.33	-0.2
1,537,387	-		OLJFJH_07530	0.33	-0.7
1,537,387	-		OLJFJH_07530	0.33	-1.4
1,537,387	-		OLJFJH_07530	0.33	+0.3
1,537,389	+		OLJFJH_07530	0.34	+0.8
1,537,404	+		OLJFJH_07530	0.39	-0.8
1,537,528	+		OLJFJH_07530	0.84	-0.4
1,537,532	+		OLJFJH_07530	0.86	+1.4
1,537,532	+		OLJFJH_07530	0.86	+1.3
1,537,532	+		OLJFJH_07530	0.86	+0.4
1,537,532	+		OLJFJH_07530	0.86	-1.7
1,537,532	+		OLJFJH_07530	0.86	+1.7
1,537,532	+		OLJFJH_07530	0.86	+1.4
1,537,533	-		OLJFJH_07530	0.86	-0.1
1,537,533	-		OLJFJH_07530	0.86	-0.7
1,537,827	-				-0.2
1,537,838	+				+2.2
1,537,841	-				-0.6
1,537,841	-				+0.7
1,537,868	+				+0.8
1,537,868	+				-1.3
1,537,911	-				+0.4
1,537,962	-				-1.6
1,537,994	+				-0.2
1,538,162	+		OLJFJH_07535	0.77	-0.4
1,538,162	+		OLJFJH_07535	0.77	+0.3
1,538,163	-		OLJFJH_07535	0.77	-1.0
1,538,163	-		OLJFJH_07535	0.77	+1.2
1,538,193	-				-1.8
1,538,302	+		OLJFJH_07540	0.79	-1.9
1,538,303	-		OLJFJH_07540	0.79	-1.6
1,538,391	+				-0.2
1,538,393	+				-0.2
1,538,393	+				+1.6
1,538,393	+				+1.6
1,538,393	+				+4.6
1,538,393	+				+1.2
1,538,394	-				+0.2
1,538,394	-				-2.8
1,538,394	-				-0.7
1,538,394	-				-1.7
1,538,395	+				+0.7
1,538,395	+				-1.0
1,538,395	+				-2.7
1,538,395	+				-2.6
1,538,396	-				+0.7
1,538,396	-				+0.1
1,538,396	-				-0.4
1,538,396	-				+2.1
1,538,398	+				-0.5
1,538,446	+				-0.0
1,538,499	-				+0.0
1,538,509	+				+0.9
1,538,545	+				+2.2
1,538,591	+				+1.3
1,538,592	-				+0.4
1,538,592	-				+0.9
1,538,621	+				-0.6
1,538,622	-				+0.8
1,538,832	-		OLJFJH_07545	0.10	+0.0
1,538,844	+		OLJFJH_07545	0.11	-0.9
1,538,845	-		OLJFJH_07545	0.11	-2.2
1,538,921	-		OLJFJH_07545	0.13	+0.5
1,539,077	+		OLJFJH_07545	0.18	+0.7
1,539,078	-		OLJFJH_07545	0.18	+2.0
1,539,192	-		OLJFJH_07545	0.21	-2.2
1,539,217	+		OLJFJH_07545	0.22	+0.9
1,539,217	+		OLJFJH_07545	0.22	-1.4
1,539,217	+		OLJFJH_07545	0.22	-0.6
1,539,217	+		OLJFJH_07545	0.22	+1.7