Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07210 and OLJFJH_07215 are separated by 308 nucleotides OLJFJH_07215 and OLJFJH_07220 are separated by 48 nucleotides OLJFJH_07220 and OLJFJH_07225 are separated by 48 nucleotides OLJFJH_07225 and OLJFJH_07230 are separated by 211 nucleotides OLJFJH_07230 and OLJFJH_07235 are separated by 24 nucleotides
OLJFJH_07210: OLJFJH_07210 - phosphoglucosamine mutase, at 1,468,073 to 1,469,407
_07210
OLJFJH_07215: OLJFJH_07215 - preprotein translocase subunit SecG, at 1,469,716 to 1,470,048
_07215
OLJFJH_07220: OLJFJH_07220 - tRNA-Leu, at 1,470,097 to 1,470,183
_07220
OLJFJH_07225: OLJFJH_07225 - tRNA-fMet, at 1,470,232 to 1,470,308
_07225
OLJFJH_07230: OLJFJH_07230 - ribosome maturation factor RimP, at 1,470,520 to 1,470,972
_07230
OLJFJH_07235: OLJFJH_07235 - transcription termination/antitermination protein NusA, at 1,470,997 to 1,472,502
_07235
Position (kb)
1469
1470
1471 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1469.430 kb on + strand at 1469.517 kb on + strand at 1469.517 kb on + strand at 1469.654 kb on + strand at 1469.654 kb on + strand at 1469.715 kb on + strand at 1469.719 kb on + strand at 1469.735 kb on + strand at 1469.790 kb on + strand, within OLJFJH_07215 at 1469.790 kb on + strand, within OLJFJH_07215 at 1469.940 kb on + strand, within OLJFJH_07215 at 1470.046 kb on + strand at 1470.046 kb on + strand at 1470.215 kb on + strand at 1470.334 kb on + strand at 1470.334 kb on + strand at 1470.416 kb on + strand at 1470.434 kb on + strand at 1470.489 kb on + strand at 1470.489 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 1,469,430 + +0.7 1,469,517 + -0.9 1,469,517 + -0.5 1,469,654 + +0.0 1,469,654 + +0.4 1,469,715 + -1.2 1,469,719 + -0.4 1,469,735 + +1.5 1,469,790 + OLJFJH_07215 0.22 -0.9 1,469,790 + OLJFJH_07215 0.22 -1.5 1,469,940 + OLJFJH_07215 0.67 -1.7 1,470,046 + +1.8 1,470,046 + -0.8 1,470,215 + -2.6 1,470,334 + -0.1 1,470,334 + -0.1 1,470,416 + +0.0 1,470,434 + +1.0 1,470,489 + -0.9 1,470,489 + -1.1
Or see this region's nucleotide sequence