Strain Fitness in Erwinia amylovora T8 around OLJFJH_07025

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,428,839	-		OLJFJH_07015	0.60	-0.3
1,428,886	+		OLJFJH_07015	0.68	-1.1
1,428,898	+		OLJFJH_07015	0.69	-0.7
1,428,899	-		OLJFJH_07015	0.70	+2.3
1,428,975	+		OLJFJH_07015	0.81	-2.0
1,429,007	+		OLJFJH_07015	0.86	+1.5
1,429,008	-		OLJFJH_07015	0.87	+0.3
1,429,010	-		OLJFJH_07015	0.87	-0.9
1,429,010	-		OLJFJH_07015	0.87	-0.7
1,429,094	+				+0.0
1,429,094	+				-0.3
1,429,095	-				+0.5
1,429,132	-				-1.0
1,429,149	+		OLJFJH_07020	0.10	-0.6
1,429,150	-		OLJFJH_07020	0.10	+2.4
1,429,291	+		OLJFJH_07020	0.39	-1.3
1,429,377	+		OLJFJH_07020	0.56	+0.2
1,429,425	+		OLJFJH_07020	0.66	-3.1
1,429,426	-		OLJFJH_07020	0.66	-0.4
1,429,639	+				+1.1
1,429,683	+				-0.2
1,429,741	-				+0.0
1,429,743	+				-1.2
1,429,743	+				+0.0
1,429,743	+				-0.8
1,429,759	-				-0.7
1,429,788	+				-1.3
1,429,789	-				-1.1
1,429,789	-				-2.8
1,429,839	+				-0.8
1,429,839	+				-1.0
1,429,840	-				-2.5
1,429,890	+				-1.4
1,429,890	+				-0.2
1,429,891	-				+0.7
1,429,891	-				-1.9
1,429,891	-				-2.3
1,429,911	-				-1.2
1,429,956	-		OLJFJH_07025	0.12	-0.9
1,430,046	+		OLJFJH_07025	0.17	+0.2
1,430,050	+		OLJFJH_07025	0.18	-1.1
1,430,050	+		OLJFJH_07025	0.18	-0.9
1,430,050	+		OLJFJH_07025	0.18	-3.2
1,430,050	+		OLJFJH_07025	0.18	-1.8
1,430,050	+		OLJFJH_07025	0.18	-0.5
1,430,050	+		OLJFJH_07025	0.18	-0.1
1,430,050	+		OLJFJH_07025	0.18	-3.0
1,430,050	+		OLJFJH_07025	0.18	-1.1
1,430,050	+		OLJFJH_07025	0.18	-1.5
1,430,050	+		OLJFJH_07025	0.18	-1.1
1,430,050	+		OLJFJH_07025	0.18	-2.0
1,430,050	+		OLJFJH_07025	0.18	-1.5
1,430,051	-		OLJFJH_07025	0.18	-1.3
1,430,051	-		OLJFJH_07025	0.18	-1.2
1,430,051	-		OLJFJH_07025	0.18	-2.2
1,430,051	-		OLJFJH_07025	0.18	-0.8
1,430,051	-		OLJFJH_07025	0.18	-2.2
1,430,051	-		OLJFJH_07025	0.18	+0.1
1,430,052	+		OLJFJH_07025	0.18	-2.3
1,430,052	+		OLJFJH_07025	0.18	-1.5
1,430,052	+		OLJFJH_07025	0.18	-0.1
1,430,052	+		OLJFJH_07025	0.18	-1.5
1,430,052	+		OLJFJH_07025	0.18	-4.5
1,430,053	-		OLJFJH_07025	0.18	-2.9
1,430,053	-		OLJFJH_07025	0.18	-3.1
1,430,053	-		OLJFJH_07025	0.18	-2.1
1,430,053	-		OLJFJH_07025	0.18	-1.7
1,430,053	-		OLJFJH_07025	0.18	-1.1
1,430,212	+		OLJFJH_07025	0.27	-2.2
1,430,225	-		OLJFJH_07025	0.28	-0.7
1,430,268	+		OLJFJH_07025	0.30	-2.6
1,430,268	+		OLJFJH_07025	0.30	+0.0
1,430,269	-		OLJFJH_07025	0.30	-1.8
1,430,269	-		OLJFJH_07025	0.30	-0.2
1,430,451	-		OLJFJH_07025	0.41	-0.7
1,430,464	+		OLJFJH_07025	0.41	-1.3
1,430,598	+		OLJFJH_07025	0.49	-0.4
1,430,604	-		OLJFJH_07025	0.49	-2.5
1,430,649	+		OLJFJH_07025	0.52	-0.6
1,430,733	+		OLJFJH_07025	0.57	-3.5
1,430,733	+		OLJFJH_07025	0.57	-1.4
1,430,734	-		OLJFJH_07025	0.57	-1.2
1,430,991	+		OLJFJH_07025	0.71	-1.8
1,431,031	+		OLJFJH_07025	0.73	-2.0
1,431,060	+		OLJFJH_07025	0.75	-2.0
1,431,177	+		OLJFJH_07025	0.82	-1.4
1,431,482	-				-1.6
1,431,483	+				+0.0
1,431,634	-				-2.0
1,431,662	+				-1.0
1,431,662	+				-1.6
1,431,663	-				-0.2
1,431,663	-				-0.1
1,431,663	-				-1.6
1,431,663	-				-2.1
1,431,716	+				-2.4
1,431,717	-				+1.0
1,431,768	-				-2.1
1,431,808	-				-0.8
1,431,808	-				-3.6
1,431,932	+				-2.5
1,431,933	-				-1.4
1,432,101	+		OLJFJH_07030	0.10	-1.3
1,432,151	+		OLJFJH_07030	0.11	-2.6
1,432,341	-		OLJFJH_07030	0.15	-1.5
1,432,349	+		OLJFJH_07030	0.15	-3.2
1,432,350	-		OLJFJH_07030	0.15	-1.6
1,432,350	-		OLJFJH_07030	0.15	-0.4
1,432,375	-		OLJFJH_07030	0.15	-2.6
1,432,375	-		OLJFJH_07030	0.15	-2.2
1,432,431	+		OLJFJH_07030	0.16	-0.2
1,432,431	+		OLJFJH_07030	0.16	-1.1
1,432,431	+		OLJFJH_07030	0.16	-1.0
1,432,432	-		OLJFJH_07030	0.16	-1.2
1,432,433	+		OLJFJH_07030	0.16	-0.9
1,432,433	+		OLJFJH_07030	0.16	-1.5
1,432,434	-		OLJFJH_07030	0.16	-0.5
1,432,434	-		OLJFJH_07030	0.16	-2.3
1,432,485	+		OLJFJH_07030	0.17	-3.3
1,432,486	-		OLJFJH_07030	0.17	-1.5