Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_06495 and OLJFJH_06500 are separated by 134 nucleotides OLJFJH_06500 and OLJFJH_06505 are separated by 12 nucleotides OLJFJH_06505 and OLJFJH_06510 overlap by 4 nucleotides
OLJFJH_06495: OLJFJH_06495 - DNA recombination protein RmuC, at 1,315,880 to 1,317,355
_06495
OLJFJH_06500: OLJFJH_06500 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE, at 1,317,490 to 1,318,245
_06500
OLJFJH_06505: OLJFJH_06505 - Ubiquinone biosynthesis accessory factor UbiJ, at 1,318,258 to 1,318,863
_06505
OLJFJH_06510: OLJFJH_06510 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 1,318,860 to 1,320,497
_06510
Position (kb)
1317
1318
1319 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1316.593 kb on + strand, within OLJFJH_06495 at 1316.725 kb on - strand, within OLJFJH_06495 at 1316.746 kb on + strand, within OLJFJH_06495 at 1316.834 kb on - strand, within OLJFJH_06495 at 1316.856 kb on + strand, within OLJFJH_06495 at 1316.898 kb on + strand, within OLJFJH_06495 at 1316.912 kb on + strand, within OLJFJH_06495 at 1316.913 kb on - strand, within OLJFJH_06495 at 1317.001 kb on + strand, within OLJFJH_06495 at 1317.001 kb on + strand, within OLJFJH_06495 at 1317.022 kb on + strand, within OLJFJH_06495 at 1317.023 kb on - strand, within OLJFJH_06495 at 1317.043 kb on + strand, within OLJFJH_06495 at 1317.044 kb on - strand, within OLJFJH_06495 at 1317.094 kb on + strand, within OLJFJH_06495 at 1317.094 kb on + strand, within OLJFJH_06495 at 1317.095 kb on - strand, within OLJFJH_06495 at 1317.149 kb on - strand, within OLJFJH_06495 at 1317.149 kb on - strand, within OLJFJH_06495 at 1317.354 kb on - strand at 1317.370 kb on + strand at 1317.370 kb on + strand at 1317.371 kb on - strand at 1317.378 kb on - strand at 1317.450 kb on + strand at 1318.265 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 1,316,593 + OLJFJH_06495 0.48 +0.1 1,316,725 - OLJFJH_06495 0.57 +1.0 1,316,746 + OLJFJH_06495 0.59 +0.6 1,316,834 - OLJFJH_06495 0.65 -1.0 1,316,856 + OLJFJH_06495 0.66 +0.2 1,316,898 + OLJFJH_06495 0.69 -0.2 1,316,912 + OLJFJH_06495 0.70 -1.2 1,316,913 - OLJFJH_06495 0.70 +0.9 1,317,001 + OLJFJH_06495 0.76 +3.0 1,317,001 + OLJFJH_06495 0.76 -0.3 1,317,022 + OLJFJH_06495 0.77 -0.7 1,317,023 - OLJFJH_06495 0.77 +1.0 1,317,043 + OLJFJH_06495 0.79 +2.3 1,317,044 - OLJFJH_06495 0.79 -1.3 1,317,094 + OLJFJH_06495 0.82 +0.5 1,317,094 + OLJFJH_06495 0.82 -0.3 1,317,095 - OLJFJH_06495 0.82 +0.4 1,317,149 - OLJFJH_06495 0.86 -0.9 1,317,149 - OLJFJH_06495 0.86 -1.6 1,317,354 - +0.2 1,317,370 + -1.0 1,317,370 + +0.8 1,317,371 - +1.0 1,317,378 - -2.0 1,317,450 + -1.1 1,318,265 + +0.1
Or see this region's nucleotide sequence