Strain Fitness in Erwinia amylovora T8 around OLJFJH_06245

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,262,335	+				-0.5
1,262,335	+				-0.3
1,262,335	+				+0.8
1,262,458	-		OLJFJH_06240	0.21	+0.0
1,262,492	+		OLJFJH_06240	0.25	+2.1
1,262,492	+		OLJFJH_06240	0.25	-0.3
1,262,493	-		OLJFJH_06240	0.25	-0.5
1,262,493	-		OLJFJH_06240	0.25	-0.1
1,262,493	-		OLJFJH_06240	0.25	-0.0
1,262,572	-		OLJFJH_06240	0.34	+0.1
1,262,572	-		OLJFJH_06240	0.34	+0.8
1,262,844	-		OLJFJH_06240	0.65	+0.3
1,263,201	-				-1.3
1,263,204	-				-2.2
1,263,223	-				-1.5
1,263,234	+				+0.4
1,263,234	+				+1.4
1,263,234	+				+0.4
1,263,234	+				-0.2
1,263,234	+				-0.1
1,263,235	-				-0.0
1,263,235	-				+0.6
1,263,239	+				+0.0
1,263,239	+				+0.8
1,263,246	+				+0.3
1,263,305	-				-1.8
1,263,382	-				+0.3
1,263,555	+		OLJFJH_06245	0.16	-1.5
1,263,589	+		OLJFJH_06245	0.18	-0.3
1,263,589	+		OLJFJH_06245	0.18	-1.8
1,263,589	+		OLJFJH_06245	0.18	-2.2
1,263,590	-		OLJFJH_06245	0.19	-1.9
1,263,590	-		OLJFJH_06245	0.19	-1.1
1,263,648	+		OLJFJH_06245	0.22	-4.1
1,263,648	+		OLJFJH_06245	0.22	-0.7
1,263,648	+		OLJFJH_06245	0.22	-1.5
1,263,649	-		OLJFJH_06245	0.23	-1.3
1,263,743	+		OLJFJH_06245	0.29	-1.1
1,263,744	-		OLJFJH_06245	0.29	-2.4
1,263,744	-		OLJFJH_06245	0.29	-0.3
1,263,744	-		OLJFJH_06245	0.29	-2.6
1,263,744	-		OLJFJH_06245	0.29	-2.8
1,263,747	+		OLJFJH_06245	0.29	-1.0
1,263,747	+		OLJFJH_06245	0.29	-1.8
1,263,748	-		OLJFJH_06245	0.29	-2.8
1,263,748	-		OLJFJH_06245	0.29	-1.6
1,263,797	+		OLJFJH_06245	0.33	-0.5
1,263,797	+		OLJFJH_06245	0.33	-1.3
1,263,831	+		OLJFJH_06245	0.35	-1.4
1,263,837	+		OLJFJH_06245	0.35	-3.5
1,263,837	+		OLJFJH_06245	0.35	-1.8
1,263,889	-		OLJFJH_06245	0.39	+0.2
1,263,996	+		OLJFJH_06245	0.46	-0.3
1,263,997	-		OLJFJH_06245	0.46	-0.7
1,264,001	+		OLJFJH_06245	0.46	-1.6
1,264,001	+		OLJFJH_06245	0.46	+0.0
1,264,060	+		OLJFJH_06245	0.50	+0.1
1,264,171	+		OLJFJH_06245	0.58	-4.4
1,264,172	-		OLJFJH_06245	0.58	-1.8
1,264,224	+		OLJFJH_06245	0.61	-2.3
1,264,224	+		OLJFJH_06245	0.61	-2.9
1,264,224	+		OLJFJH_06245	0.61	-1.6
1,264,236	+		OLJFJH_06245	0.62	-1.6
1,264,236	+		OLJFJH_06245	0.62	-0.6
1,264,237	-		OLJFJH_06245	0.62	-1.8
1,264,288	-		OLJFJH_06245	0.66	-2.3
1,264,357	-		OLJFJH_06245	0.70	-1.0
1,264,357	-		OLJFJH_06245	0.70	-0.6
1,264,357	-		OLJFJH_06245	0.70	-2.2
1,264,375	+		OLJFJH_06245	0.72	-0.7
1,264,375	+		OLJFJH_06245	0.72	-3.6
1,264,376	-		OLJFJH_06245	0.72	-2.3
1,264,376	-		OLJFJH_06245	0.72	-1.7
1,264,376	-		OLJFJH_06245	0.72	-0.6
1,264,477	+		OLJFJH_06245	0.78	-1.2
1,264,477	+		OLJFJH_06245	0.78	-1.6
1,264,535	-		OLJFJH_06245	0.82	-0.5
1,264,579	+		OLJFJH_06245	0.85	+1.3
1,264,579	+		OLJFJH_06245	0.85	-1.4
1,264,580	-		OLJFJH_06245	0.85	+1.0
1,264,580	-		OLJFJH_06245	0.85	-1.8
1,264,580	-		OLJFJH_06245	0.85	-2.5
1,264,580	-		OLJFJH_06245	0.85	-0.2
1,264,580	-		OLJFJH_06245	0.85	-0.8
1,264,580	-		OLJFJH_06245	0.85	-1.7
1,264,591	+		OLJFJH_06245	0.86	+0.3
1,264,592	-		OLJFJH_06245	0.86	-2.3
1,264,758	+				+1.5
1,264,758	+				+1.5
1,264,759	-				-2.7
1,264,759	-				-0.6
1,264,759	-				-1.5
1,264,759	-				+0.2
1,264,759	-				-1.3
1,264,776	+				+0.6
1,264,776	+				+2.0
1,264,777	-				+0.1
1,264,777	-				+0.1
1,264,898	-		OLJFJH_06250	0.16	-0.3
1,265,070	-		OLJFJH_06250	0.77	+0.4
1,265,160	-				+0.6
1,265,168	+				-2.3
1,265,168	+				+2.3
1,265,170	+				+2.1
1,265,171	-				+1.0
1,265,173	+				-0.8
1,265,174	-				-0.5
1,265,183	+				-1.1
1,265,183	+				-0.3
1,265,184	-				-1.5
1,265,184	-				-0.4
1,265,184	-				+0.6
1,265,218	+				-0.3
1,265,222	+				-1.2