Strain Fitness in Erwinia amylovora T8 around OLJFJH_05920

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,193,631	+		OLJFJH_05915	0.13	+0.4
1,193,631	+		OLJFJH_05915	0.13	-0.9
1,193,631	+		OLJFJH_05915	0.13	-0.7
1,193,632	-		OLJFJH_05915	0.13	-1.1
1,193,683	+		OLJFJH_05915	0.18	-1.7
1,193,684	-		OLJFJH_05915	0.18	-2.1
1,193,760	+		OLJFJH_05915	0.25	-2.8
1,193,760	+		OLJFJH_05915	0.25	-1.4
1,193,760	+		OLJFJH_05915	0.25	-2.8
1,193,772	+		OLJFJH_05915	0.27	-2.4
1,193,772	+		OLJFJH_05915	0.27	-3.5
1,193,772	+		OLJFJH_05915	0.27	-0.8
1,193,772	+		OLJFJH_05915	0.27	-1.6
1,193,772	+		OLJFJH_05915	0.27	+0.1
1,193,772	+		OLJFJH_05915	0.27	-1.7
1,193,772	+		OLJFJH_05915	0.27	+0.4
1,193,772	+		OLJFJH_05915	0.27	-2.5
1,193,772	+		OLJFJH_05915	0.27	-1.4
1,193,773	-		OLJFJH_05915	0.27	-3.5
1,193,773	-		OLJFJH_05915	0.27	-0.5
1,193,773	-		OLJFJH_05915	0.27	-0.3
1,193,828	-		OLJFJH_05915	0.32	-3.3
1,194,000	+		OLJFJH_05915	0.49	-0.4
1,194,000	+		OLJFJH_05915	0.49	-0.7
1,194,009	+		OLJFJH_05915	0.50	-1.5
1,194,039	-		OLJFJH_05915	0.53	-4.4
1,194,246	+		OLJFJH_05915	0.73	-0.2
1,194,246	+		OLJFJH_05915	0.73	-2.3
1,194,278	-		OLJFJH_05915	0.76	-1.2
1,194,378	+		OLJFJH_05915	0.86	+0.3
1,194,378	+		OLJFJH_05915	0.86	-2.0
1,194,398	+		OLJFJH_05915	0.88	-0.1
1,194,474	+				-0.6
1,194,518	+				-0.1
1,194,670	+		OLJFJH_05920	0.11	-0.5
1,194,718	+		OLJFJH_05920	0.16	+0.1
1,194,718	+		OLJFJH_05920	0.16	-1.3
1,194,718	+		OLJFJH_05920	0.16	-1.8
1,194,719	-		OLJFJH_05920	0.17	-0.3
1,194,719	-		OLJFJH_05920	0.17	+1.3
1,194,719	-		OLJFJH_05920	0.17	-0.7
1,194,732	+		OLJFJH_05920	0.18	+0.7
1,194,732	+		OLJFJH_05920	0.18	-0.4
1,194,732	+		OLJFJH_05920	0.18	+0.3
1,194,732	+		OLJFJH_05920	0.18	+0.7
1,194,733	-		OLJFJH_05920	0.18	-1.4
1,194,733	-		OLJFJH_05920	0.18	+2.1
1,194,733	-		OLJFJH_05920	0.18	-0.5
1,194,759	+		OLJFJH_05920	0.21	-0.3
1,194,759	+		OLJFJH_05920	0.21	-1.4
1,194,813	+		OLJFJH_05920	0.28	-1.5
1,194,813	+		OLJFJH_05920	0.28	-0.1
1,194,814	-		OLJFJH_05920	0.28	-0.1
1,194,871	+		OLJFJH_05920	0.35	-2.1
1,194,871	+		OLJFJH_05920	0.35	-0.9
1,194,872	-		OLJFJH_05920	0.35	+0.7
1,194,919	+		OLJFJH_05920	0.41	-0.9
1,194,924	+		OLJFJH_05920	0.42	-1.7
1,194,925	-		OLJFJH_05920	0.42	-0.3
1,195,086	+		OLJFJH_05920	0.61	+0.7
1,195,087	-		OLJFJH_05920	0.62	-0.3
1,195,161	+		OLJFJH_05920	0.71	-1.3
1,195,162	-		OLJFJH_05920	0.71	-1.3
1,195,259	+		OLJFJH_05920	0.83	-1.7
1,195,259	+		OLJFJH_05920	0.83	+1.3
1,195,260	-		OLJFJH_05920	0.83	-2.3
1,195,260	-		OLJFJH_05920	0.83	-1.2
1,195,305	+		OLJFJH_05920	0.88	-1.1
1,195,306	-		OLJFJH_05920	0.88	-0.7
1,195,413	-				-0.3
1,195,413	-				+1.3
1,195,526	-				+1.9
1,195,575	+		OLJFJH_05925	0.16	+2.2
1,195,575	+		OLJFJH_05925	0.16	+1.0
1,195,575	+		OLJFJH_05925	0.16	-1.0
1,195,687	+		OLJFJH_05925	0.40	-0.9
1,195,688	-		OLJFJH_05925	0.40	-0.1
1,195,703	-		OLJFJH_05925	0.43	-0.2
1,195,851	-		OLJFJH_05925	0.75	+0.3
1,195,956	+				-0.4
1,195,964	+				+1.4
1,195,964	+				-0.5
1,195,964	+				+2.5
1,195,965	-				+1.4
1,195,965	-				-0.3
1,196,027	-				-0.2
1,196,027	-				+0.5
1,196,028	+				+0.4
1,196,029	-				+0.5
1,196,029	-				-0.5
1,196,043	-				-1.3
1,196,303	+		OLJFJH_05930	0.21	+1.4
1,196,303	+		OLJFJH_05930	0.21	+1.0
1,196,303	+		OLJFJH_05930	0.21	+0.2
1,196,359	-		OLJFJH_05930	0.25	+4.4