Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_05625 and OLJFJH_05630 are separated by 214 nucleotides OLJFJH_05630 and OLJFJH_05635 are separated by 35 nucleotides OLJFJH_05635 and OLJFJH_05640 are separated by 10 nucleotides OLJFJH_05640 and OLJFJH_05645 overlap by 4 nucleotides
OLJFJH_05625: OLJFJH_05625 - type II toxin-antitoxin system PemK/MazF family toxin, at 1,145,735 to 1,146,616
_05625
OLJFJH_05630: OLJFJH_05630 - sce7726 family protein, at 1,146,831 to 1,147,526
_05630
OLJFJH_05635: OLJFJH_05635 - beta family protein, at 1,147,562 to 1,148,674
_05635
OLJFJH_05640: OLJFJH_05640 - ImmA/IrrE family metallo-endopeptidase, at 1,148,685 to 1,149,179
_05640
OLJFJH_05645: OLJFJH_05645 - hypothetical protein, at 1,149,176 to 1,149,763
_05645
Position (kb) 1147
1148
1149 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1146.740 kb on - strand at 1147.031 kb on + strand, within OLJFJH_05630 at 1147.311 kb on - strand, within OLJFJH_05630 at 1147.707 kb on - strand, within OLJFJH_05635 at 1147.780 kb on + strand, within OLJFJH_05635 at 1147.983 kb on + strand, within OLJFJH_05635 at 1148.221 kb on + strand, within OLJFJH_05635 at 1148.648 kb on + strand at 1148.649 kb on - strand at 1148.898 kb on + strand, within OLJFJH_05640 at 1148.901 kb on - strand, within OLJFJH_05640 at 1149.070 kb on - strand, within OLJFJH_05640 at 1149.203 kb on + strand at 1149.308 kb on + strand, within OLJFJH_05645 at 1149.345 kb on - strand, within OLJFJH_05645 at 1149.424 kb on + strand, within OLJFJH_05645
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 1,146,740 - -0.4 1,147,031 + OLJFJH_05630 0.29 -1.4 1,147,311 - OLJFJH_05630 0.69 -1.9 1,147,707 - OLJFJH_05635 0.13 -3.2 1,147,780 + OLJFJH_05635 0.20 -0.2 1,147,983 + OLJFJH_05635 0.38 -3.1 1,148,221 + OLJFJH_05635 0.59 -3.2 1,148,648 + -1.9 1,148,649 - -2.4 1,148,898 + OLJFJH_05640 0.43 -1.8 1,148,901 - OLJFJH_05640 0.44 +0.4 1,149,070 - OLJFJH_05640 0.78 -0.3 1,149,203 + +1.0 1,149,308 + OLJFJH_05645 0.22 -0.3 1,149,345 - OLJFJH_05645 0.29 +1.1 1,149,424 + OLJFJH_05645 0.42 +2.7
Or see this region's nucleotide sequence