Strain Fitness in Erwinia amylovora T8 around OLJFJH_05565
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 |
---|---|---|---|---|---|
remove | |||||
1,135,349 | - | +2.1 | |||
1,135,619 | - | OLJFJH_05565 | 0.89 | -1.5 | |
1,135,648 | - | -0.5 | |||
1,135,648 | - | -2.3 | |||
1,135,657 | - | -0.0 | |||
1,136,375 | - | +0.7 | |||
1,136,375 | - | +0.1 | |||
1,136,377 | - | -1.0 | |||
1,136,377 | - | -1.3 | |||
1,136,423 | + | -0.5 | |||
1,136,449 | + | -0.2 | |||
1,136,536 | + | +2.4 | |||
1,136,537 | - | -0.8 | |||
1,136,537 | - | +1.0 | |||
1,136,537 | - | +0.3 | |||
1,136,567 | + | +0.3 | |||
1,136,568 | - | +0.4 | |||
1,136,568 | - | +0.8 | |||
1,136,594 | - | +0.2 |
Or see this region's nucleotide sequence