Strain Fitness in Erwinia amylovora T8 around OLJFJH_05490

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,114,116	-				+0.2
1,114,169	+				+2.2
1,114,281	+				-1.1
1,114,290	+				-2.0
1,114,291	-				+0.1
1,114,293	-				-2.2
1,114,343	+				+2.8
1,114,343	+				-0.6
1,114,521	-		OLJFJH_05485	0.40	-1.8
1,114,733	+		OLJFJH_05485	0.80	+0.5
1,114,734	-		OLJFJH_05485	0.80	-0.3
1,114,805	+				-0.4
1,114,806	-				-1.2
1,114,806	-				-1.5
1,114,806	-				+0.2
1,114,806	-				+0.9
1,114,809	+				+0.4
1,114,809	+				-0.0
1,114,809	+				+1.7
1,114,810	-				-0.4
1,114,810	-				-1.6
1,114,810	-				+1.2
1,114,826	+				+2.2
1,114,938	+				-0.0
1,114,938	+				-0.8
1,114,939	-				+1.4
1,114,985	+				-1.8
1,114,986	-				+1.2
1,115,077	+				+0.8
1,115,078	-				+1.0
1,115,078	-				+0.1
1,115,098	+				-0.2
1,115,099	-				-0.2
1,115,136	+				+1.1
1,115,136	+				-1.0
1,115,137	-				+0.0
1,115,159	+				-0.3
1,115,159	+				+0.3
1,115,159	+				+1.3
1,115,159	+				+0.1
1,115,160	-				+0.0
1,115,160	-				+0.2
1,115,160	-				-1.5
1,115,160	-				+0.0
1,115,256	+		OLJFJH_05490	0.12	+1.3
1,115,257	-		OLJFJH_05490	0.12	-0.4
1,115,257	-		OLJFJH_05490	0.12	+0.1
1,115,257	-		OLJFJH_05490	0.12	-0.5
1,115,265	-		OLJFJH_05490	0.13	-0.9
1,115,265	-		OLJFJH_05490	0.13	+1.9
1,115,289	+		OLJFJH_05490	0.14	+0.6
1,115,290	-		OLJFJH_05490	0.14	-1.4
1,115,304	-		OLJFJH_05490	0.16	+0.9
1,115,330	+		OLJFJH_05490	0.17	-0.7
1,115,344	-		OLJFJH_05490	0.18	+1.2
1,115,387	-		OLJFJH_05490	0.22	+1.2
1,115,448	-		OLJFJH_05490	0.26	+0.3
1,115,515	+		OLJFJH_05490	0.31	-1.4
1,115,554	+		OLJFJH_05490	0.34	-0.1
1,115,555	-		OLJFJH_05490	0.34	+0.0
1,115,555	-		OLJFJH_05490	0.34	+4.2
1,115,555	-		OLJFJH_05490	0.34	+2.3
1,115,557	+		OLJFJH_05490	0.34	+1.1
1,115,558	-		OLJFJH_05490	0.34	-0.8
1,115,558	-		OLJFJH_05490	0.34	+2.4
1,115,558	-		OLJFJH_05490	0.34	+0.4
1,115,558	-		OLJFJH_05490	0.34	-0.3
1,115,612	+		OLJFJH_05490	0.38	-0.2
1,115,612	+		OLJFJH_05490	0.38	-3.0
1,115,612	+		OLJFJH_05490	0.38	+0.6
1,115,616	-		OLJFJH_05490	0.38	+0.0
1,115,711	+		OLJFJH_05490	0.45	-0.0
1,115,712	-		OLJFJH_05490	0.45	-1.3
1,115,725	-		OLJFJH_05490	0.46	+1.1
1,115,807	-		OLJFJH_05490	0.52	-0.2
1,115,807	-		OLJFJH_05490	0.52	-1.2
1,115,810	+		OLJFJH_05490	0.52	-0.2
1,115,810	+		OLJFJH_05490	0.52	-0.4
1,115,810	+		OLJFJH_05490	0.52	+0.7
1,115,810	+		OLJFJH_05490	0.52	-0.6
1,115,810	+		OLJFJH_05490	0.52	-0.8
1,115,811	-		OLJFJH_05490	0.52	+0.1
1,115,811	-		OLJFJH_05490	0.52	-0.0
1,115,811	-		OLJFJH_05490	0.52	-0.2
1,115,811	-		OLJFJH_05490	0.52	-1.9
1,115,811	-		OLJFJH_05490	0.52	+0.3
1,115,815	-		OLJFJH_05490	0.53	+2.5
1,115,815	-		OLJFJH_05490	0.53	-0.8
1,115,815	-		OLJFJH_05490	0.53	+0.3
1,115,815	-		OLJFJH_05490	0.53	-1.9
1,115,815	-		OLJFJH_05490	0.53	-0.2
1,115,815	-		OLJFJH_05490	0.53	-1.4
1,115,822	+		OLJFJH_05490	0.53	-0.4
1,115,943	-		OLJFJH_05490	0.62	+1.3
1,116,028	-		OLJFJH_05490	0.68	+0.5
1,116,096	+		OLJFJH_05490	0.73	-1.6
1,116,126	+		OLJFJH_05490	0.75	+0.4
1,116,126	+		OLJFJH_05490	0.75	+1.0
1,116,126	+		OLJFJH_05490	0.75	-0.3
1,116,127	-		OLJFJH_05490	0.75	+0.6
1,116,129	+		OLJFJH_05490	0.76	+1.0
1,116,129	+		OLJFJH_05490	0.76	+0.1
1,116,129	+		OLJFJH_05490	0.76	+0.0
1,116,137	+		OLJFJH_05490	0.76	-0.0
1,116,138	-		OLJFJH_05490	0.76	-1.7
1,116,139	+		OLJFJH_05490	0.76	+1.7
1,116,139	+		OLJFJH_05490	0.76	+2.3
1,116,139	+		OLJFJH_05490	0.76	+2.3
1,116,139	+		OLJFJH_05490	0.76	+0.2
1,116,140	-		OLJFJH_05490	0.76	+1.5
1,116,140	-		OLJFJH_05490	0.76	+0.4
1,116,140	-		OLJFJH_05490	0.76	+0.6
1,116,140	-		OLJFJH_05490	0.76	+0.3
1,116,173	-		OLJFJH_05490	0.79	+1.7
1,116,286	-		OLJFJH_05490	0.87	-2.0
1,116,459	-				-0.7
1,116,524	+				-1.1
1,116,524	+				-0.0
1,116,525	-				+1.1
1,116,525	-				+0.4
1,116,535	+				-1.5
1,116,536	-				+0.4
1,116,561	+				-1.1
1,116,562	-				-0.4
1,116,564	+				-3.5
1,116,564	+				-0.2
1,116,565	-				-1.9
1,116,565	-				-1.2
1,116,565	-				-1.1
1,116,565	-				-1.7
1,116,862	+		OLJFJH_05495	0.24	-1.8
1,116,956	-		OLJFJH_05495	0.31	-1.2
1,116,956	-		OLJFJH_05495	0.31	-3.9
1,116,962	+		OLJFJH_05495	0.31	-2.0
1,116,963	-		OLJFJH_05495	0.31	-3.1
1,116,963	-		OLJFJH_05495	0.31	-1.1
1,116,981	+		OLJFJH_05495	0.32	-1.1
1,116,982	-		OLJFJH_05495	0.33	+2.2
1,117,107	+		OLJFJH_05495	0.41	-2.1
1,117,107	+		OLJFJH_05495	0.41	-0.9
1,117,108	-		OLJFJH_05495	0.41	-2.9