Strain Fitness in Erwinia amylovora T8 around OLJFJH_05315

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
1,056,163	-		OLJFJH_05310	0.33	+0.9
1,056,466	-				+0.1
1,056,466	-				+0.4
1,056,688	+				-0.2
1,056,688	+				+0.9
1,056,859	+				-1.2
1,056,860	-				-0.4
1,056,869	+				+1.0
1,056,880	-				-0.1
1,056,880	-				-0.3
1,056,900	+				+0.2
1,056,902	+				+0.5
1,056,903	-				+0.2
1,056,986	+				-0.1
1,056,986	+				+0.7
1,057,121	+				+1.6
1,057,122	-				+0.2
1,057,151	+				-0.4
1,057,186	+				-0.8
1,057,186	+				-0.5
1,057,186	+				+0.6
1,057,288	+		OLJFJH_05315	0.20	+0.6
1,057,297	+		OLJFJH_05315	0.22	-0.1
1,057,298	-		OLJFJH_05315	0.22	-1.1
1,057,298	-		OLJFJH_05315	0.22	+0.7
1,057,350	+		OLJFJH_05315	0.30	+2.1
1,057,417	+		OLJFJH_05315	0.41	+1.3
1,057,465	+		OLJFJH_05315	0.48	-0.1
1,057,483	+		OLJFJH_05315	0.51	+0.5
1,057,484	-		OLJFJH_05315	0.51	-0.3
1,057,484	-		OLJFJH_05315	0.51	+2.2
1,057,484	-		OLJFJH_05315	0.51	-0.5
1,057,636	+		OLJFJH_05315	0.76	+0.1
1,057,684	-		OLJFJH_05315	0.83	-0.2
1,057,709	+		OLJFJH_05315	0.87	+0.9
1,057,761	+				+0.7
1,057,761	+				+1.6
1,057,762	-				+0.7
1,057,762	-				+1.0