Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04905 and OLJFJH_04910 are separated by 336 nucleotides OLJFJH_04910 and OLJFJH_04915 are separated by 452 nucleotides
OLJFJH_04905: OLJFJH_04905 - GTP pyrophosphokinase, at 971,547 to 972,167
_04905
OLJFJH_04910: OLJFJH_04910 - hypothetical protein, at 972,504 to 972,752
_04910
OLJFJH_04915: OLJFJH_04915 - carbon-nitrogen hydrolase family protein, at 973,205 to 974,065
_04915
Position (kb) 972
973 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 971.504 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.552 kb on + strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.553 kb on - strand at 971.619 kb on + strand, within OLJFJH_04905 at 971.621 kb on + strand, within OLJFJH_04905 at 971.621 kb on + strand, within OLJFJH_04905 at 971.634 kb on + strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.635 kb on - strand, within OLJFJH_04905 at 971.636 kb on + strand, within OLJFJH_04905 at 971.636 kb on + strand, within OLJFJH_04905 at 971.637 kb on - strand, within OLJFJH_04905 at 971.668 kb on + strand, within OLJFJH_04905 at 971.864 kb on + strand, within OLJFJH_04905 at 971.865 kb on - strand, within OLJFJH_04905 at 971.934 kb on - strand, within OLJFJH_04905 at 971.941 kb on - strand, within OLJFJH_04905 at 971.941 kb on - strand, within OLJFJH_04905 at 971.989 kb on + strand, within OLJFJH_04905 at 971.989 kb on + strand, within OLJFJH_04905 at 972.053 kb on + strand, within OLJFJH_04905 at 972.055 kb on + strand, within OLJFJH_04905 at 972.055 kb on + strand, within OLJFJH_04905 at 972.056 kb on - strand, within OLJFJH_04905 at 972.159 kb on + strand at 972.160 kb on - strand at 972.359 kb on + strand at 972.364 kb on + strand at 972.399 kb on + strand at 972.454 kb on + strand at 972.454 kb on + strand at 972.461 kb on + strand at 972.528 kb on + strand at 972.685 kb on + strand, within OLJFJH_04910 at 973.102 kb on + strand at 973.103 kb on - strand at 973.103 kb on - strand at 973.104 kb on + strand at 973.116 kb on - strand at 973.145 kb on + strand at 973.156 kb on - strand at 973.204 kb on + strand at 973.204 kb on + strand at 973.205 kb on - strand at 973.205 kb on - strand at 973.353 kb on + strand, within OLJFJH_04915 at 973.502 kb on - strand, within OLJFJH_04915 at 973.502 kb on - strand, within OLJFJH_04915 at 973.528 kb on + strand, within OLJFJH_04915 at 973.733 kb on + strand, within OLJFJH_04915 at 973.733 kb on + strand, within OLJFJH_04915
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 971,504 + +0.5 971,552 + +0.4 971,552 + +1.8 971,552 + -0.9 971,552 + -0.5 971,553 - +0.5 971,553 - +1.7 971,553 - +2.4 971,553 - -0.2 971,553 - +1.5 971,553 - -0.7 971,619 + OLJFJH_04905 0.12 +1.4 971,621 + OLJFJH_04905 0.12 +0.0 971,621 + OLJFJH_04905 0.12 +1.4 971,634 + OLJFJH_04905 0.14 +1.2 971,635 - OLJFJH_04905 0.14 -0.4 971,635 - OLJFJH_04905 0.14 +0.8 971,635 - OLJFJH_04905 0.14 -0.2 971,636 + OLJFJH_04905 0.14 -0.4 971,636 + OLJFJH_04905 0.14 -1.6 971,637 - OLJFJH_04905 0.14 +0.7 971,668 + OLJFJH_04905 0.19 +0.1 971,864 + OLJFJH_04905 0.51 -0.9 971,865 - OLJFJH_04905 0.51 +0.1 971,934 - OLJFJH_04905 0.62 +0.4 971,941 - OLJFJH_04905 0.63 +3.9 971,941 - OLJFJH_04905 0.63 -0.3 971,989 + OLJFJH_04905 0.71 -1.0 971,989 + OLJFJH_04905 0.71 -3.3 972,053 + OLJFJH_04905 0.81 -2.4 972,055 + OLJFJH_04905 0.82 +0.9 972,055 + OLJFJH_04905 0.82 -1.1 972,056 - OLJFJH_04905 0.82 -0.0 972,159 + -0.8 972,160 - -0.3 972,359 + +1.9 972,364 + +1.0 972,399 + +2.0 972,454 + -1.7 972,454 + -0.2 972,461 + -1.7 972,528 + -0.6 972,685 + OLJFJH_04910 0.73 -1.1 973,102 + +1.4 973,103 - +3.4 973,103 - -0.0 973,104 + -0.5 973,116 - -1.5 973,145 + -0.5 973,156 - -0.3 973,204 + +3.4 973,204 + -1.8 973,205 - +0.0 973,205 - +1.0 973,353 + OLJFJH_04915 0.17 +0.2 973,502 - OLJFJH_04915 0.34 -0.3 973,502 - OLJFJH_04915 0.34 -0.5 973,528 + OLJFJH_04915 0.38 -2.1 973,733 + OLJFJH_04915 0.61 +0.2 973,733 + OLJFJH_04915 0.61 +0.2
Or see this region's nucleotide sequence