Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02685 and OLJFJH_02695 are separated by 639 nucleotides OLJFJH_02695 and OLJFJH_02700 are separated by 114 nucleotides OLJFJH_02700 and OLJFJH_02705 are separated by 98 nucleotides
OLJFJH_02685: OLJFJH_02685 - hypothetical protein, at 487,925 to 488,260
_02685
OLJFJH_02695: OLJFJH_02695 - hypothetical protein, at 488,900 to 488,989
_02695
OLJFJH_02700: OLJFJH_02700 - recombinase family protein, at 489,104 to 489,724
_02700
OLJFJH_02705: OLJFJH_02705 - hypothetical protein, at 489,823 to 490,215
_02705
Position (kb) 488
489 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 488.017 kb on + strand, within OLJFJH_02685 at 488.018 kb on - strand, within OLJFJH_02685 at 488.018 kb on - strand, within OLJFJH_02685 at 488.022 kb on - strand, within OLJFJH_02685 at 488.035 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.037 kb on + strand, within OLJFJH_02685 at 488.038 kb on - strand, within OLJFJH_02685 at 488.038 kb on - strand, within OLJFJH_02685 at 488.041 kb on + strand, within OLJFJH_02685 at 488.041 kb on + strand, within OLJFJH_02685 at 488.042 kb on - strand, within OLJFJH_02685 at 488.043 kb on + strand, within OLJFJH_02685 at 488.044 kb on - strand, within OLJFJH_02685 at 488.044 kb on - strand, within OLJFJH_02685 at 488.131 kb on + strand, within OLJFJH_02685 at 488.187 kb on - strand, within OLJFJH_02685 at 488.241 kb on - strand at 488.245 kb on + strand at 488.263 kb on + strand at 488.264 kb on - strand at 488.307 kb on - strand at 488.307 kb on - strand at 488.328 kb on - strand at 488.632 kb on - strand at 488.634 kb on + strand at 488.664 kb on - strand at 488.671 kb on - strand at 488.694 kb on + strand at 488.695 kb on - strand at 488.695 kb on - strand at 488.702 kb on + strand at 488.709 kb on + strand at 488.710 kb on - strand at 488.789 kb on - strand at 488.789 kb on - strand at 488.840 kb on - strand at 488.844 kb on - strand at 488.844 kb on - strand at 488.845 kb on + strand at 488.913 kb on + strand, within OLJFJH_02695 at 488.925 kb on + strand, within OLJFJH_02695 at 489.134 kb on - strand at 489.202 kb on + strand, within OLJFJH_02700 at 489.295 kb on + strand, within OLJFJH_02700 at 489.391 kb on - strand, within OLJFJH_02700 at 489.416 kb on - strand, within OLJFJH_02700 at 489.417 kb on + strand, within OLJFJH_02700 at 489.418 kb on - strand, within OLJFJH_02700 at 489.454 kb on + strand, within OLJFJH_02700 at 489.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 488,017 + OLJFJH_02685 0.27 +0.6 488,018 - OLJFJH_02685 0.28 +0.1 488,018 - OLJFJH_02685 0.28 -0.1 488,022 - OLJFJH_02685 0.29 +0.1 488,035 + OLJFJH_02685 0.33 -0.4 488,037 + OLJFJH_02685 0.33 +0.5 488,037 + OLJFJH_02685 0.33 -0.5 488,037 + OLJFJH_02685 0.33 +0.8 488,038 - OLJFJH_02685 0.34 +0.1 488,038 - OLJFJH_02685 0.34 +0.2 488,041 + OLJFJH_02685 0.35 -3.4 488,041 + OLJFJH_02685 0.35 -2.0 488,042 - OLJFJH_02685 0.35 -0.2 488,043 + OLJFJH_02685 0.35 -0.6 488,044 - OLJFJH_02685 0.35 +0.0 488,044 - OLJFJH_02685 0.35 -0.4 488,131 + OLJFJH_02685 0.61 -0.3 488,187 - OLJFJH_02685 0.78 +0.7 488,241 - -1.2 488,245 + +0.0 488,263 + -0.6 488,264 - -2.1 488,307 - -0.1 488,307 - +0.8 488,328 - +1.3 488,632 - -1.0 488,634 + -3.5 488,664 - -0.3 488,671 - +0.4 488,694 + -0.5 488,695 - -1.5 488,695 - -0.7 488,702 + -0.9 488,709 + -0.1 488,710 - +0.3 488,789 - +3.4 488,789 - -0.9 488,840 - +2.5 488,844 - +0.3 488,844 - +0.2 488,845 + +1.2 488,913 + OLJFJH_02695 0.14 -1.1 488,925 + OLJFJH_02695 0.28 -0.2 489,134 - -0.6 489,202 + OLJFJH_02700 0.16 +0.0 489,295 + OLJFJH_02700 0.31 -1.4 489,391 - OLJFJH_02700 0.46 -1.0 489,416 - OLJFJH_02700 0.50 +4.7 489,417 + OLJFJH_02700 0.50 +0.0 489,418 - OLJFJH_02700 0.51 +0.3 489,454 + OLJFJH_02700 0.56 -0.1 489,859 - -0.7
Or see this region's nucleotide sequence