Strain Fitness in Erwinia amylovora T8 around OLJFJH_02605
Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 |
|---|---|---|---|---|---|
| remove | |||||
| 471,890 | + | -1.9 | |||
| 471,890 | + | +1.2 | |||
| 471,905 | - | +0.5 | |||
| 471,951 | + | +0.6 | |||
| 471,951 | + | +0.8 | |||
| 472,283 | + | OLJFJH_02610 | 0.73 | -0.4 | |
| 472,283 | + | OLJFJH_02610 | 0.73 | +1.0 | |
| 472,284 | - | OLJFJH_02610 | 0.73 | +1.1 | |
| 472,284 | - | OLJFJH_02610 | 0.73 | -0.8 | |
| 472,320 | - | OLJFJH_02610 | 0.81 | -0.3 | |
| 472,385 | - | -0.4 | |||
| 472,385 | - | -0.5 | |||
| 472,421 | + | +0.6 | |||
| 472,421 | + | +2.8 | |||
| 472,422 | - | +1.0 | |||
| 472,481 | + | -1.7 | |||
| 472,481 | + | -0.3 | |||
| 472,482 | - | +4.2 | |||
| 472,482 | - | -1.5 | |||
| 472,482 | - | -0.2 | |||
| 472,482 | - | +0.2 | |||
| 472,482 | - | -1.0 | |||
| 472,482 | - | +0.6 | |||
| 472,485 | + | -0.3 | |||
| 472,639 | - | +3.4 | |||
| 472,639 | - | +2.6 | |||
| 472,700 | - | -0.7 |
Or see this region's nucleotide sequence