Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_00770 and OLJFJH_00775 are separated by 133 nucleotides OLJFJH_00775 and OLJFJH_00780 overlap by 4 nucleotides OLJFJH_00780 and OLJFJH_00785 are separated by 77 nucleotides
OLJFJH_00770: OLJFJH_00770 - tRNA glutamyl-Q(34) synthetase GluQRS, at 73,951 to 74,859
_00770
OLJFJH_00775: OLJFJH_00775 - polynucleotide adenylyltransferase PcnB, at 74,993 to 76,342
_00775
OLJFJH_00780: OLJFJH_00780 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 76,339 to 76,821
_00780
OLJFJH_00785: OLJFJH_00785 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 76,899 to 77,693
_00785
Position (kb) 74
75
76
77 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 74.035 kb on + strand at 74.036 kb on - strand at 74.036 kb on - strand at 74.036 kb on - strand at 74.085 kb on + strand, within OLJFJH_00770 at 74.086 kb on - strand, within OLJFJH_00770 at 74.086 kb on - strand, within OLJFJH_00770 at 74.201 kb on - strand, within OLJFJH_00770 at 74.242 kb on + strand, within OLJFJH_00770 at 74.243 kb on - strand, within OLJFJH_00770 at 74.250 kb on + strand, within OLJFJH_00770 at 74.290 kb on + strand, within OLJFJH_00770 at 74.352 kb on - strand, within OLJFJH_00770 at 74.352 kb on - strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.355 kb on + strand, within OLJFJH_00770 at 74.364 kb on - strand, within OLJFJH_00770 at 74.462 kb on - strand, within OLJFJH_00770 at 74.594 kb on + strand, within OLJFJH_00770 at 74.594 kb on + strand, within OLJFJH_00770 at 74.595 kb on - strand, within OLJFJH_00770 at 74.628 kb on + strand, within OLJFJH_00770 at 74.629 kb on - strand, within OLJFJH_00770 at 74.759 kb on + strand, within OLJFJH_00770 at 74.760 kb on - strand, within OLJFJH_00770 at 74.790 kb on + strand at 74.790 kb on + strand at 74.793 kb on + strand at 74.793 kb on + strand at 74.794 kb on - strand at 74.794 kb on - strand at 74.823 kb on + strand at 74.823 kb on + strand at 74.824 kb on - strand at 74.824 kb on - strand at 74.863 kb on - strand at 74.888 kb on + strand at 75.196 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.431 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.709 kb on + strand, within OLJFJH_00775 at 75.718 kb on + strand, within OLJFJH_00775 at 75.731 kb on + strand, within OLJFJH_00775 at 75.793 kb on + strand, within OLJFJH_00775 at 75.793 kb on + strand, within OLJFJH_00775 at 75.947 kb on + strand, within OLJFJH_00775 at 75.947 kb on + strand, within OLJFJH_00775 at 75.950 kb on + strand, within OLJFJH_00775 at 76.021 kb on + strand, within OLJFJH_00775 at 76.021 kb on + strand, within OLJFJH_00775 at 76.111 kb on + strand, within OLJFJH_00775 at 76.111 kb on + strand, within OLJFJH_00775 at 76.800 kb on + strand at 76.819 kb on + strand at 76.862 kb on + strand at 76.896 kb on - strand at 76.949 kb on + strand at 76.950 kb on - strand at 77.051 kb on - strand, within OLJFJH_00785 at 77.097 kb on + strand, within OLJFJH_00785 at 77.098 kb on - strand, within OLJFJH_00785 at 77.160 kb on - strand, within OLJFJH_00785 at 77.160 kb on - strand, within OLJFJH_00785 at 77.167 kb on - strand, within OLJFJH_00785 at 77.167 kb on - strand, within OLJFJH_00785
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-3 remove 74,035 + -0.6 74,036 - +0.9 74,036 - +1.1 74,036 - -2.2 74,085 + OLJFJH_00770 0.15 -1.3 74,086 - OLJFJH_00770 0.15 -0.4 74,086 - OLJFJH_00770 0.15 -2.0 74,201 - OLJFJH_00770 0.28 +0.5 74,242 + OLJFJH_00770 0.32 +1.4 74,243 - OLJFJH_00770 0.32 +0.6 74,250 + OLJFJH_00770 0.33 +1.2 74,290 + OLJFJH_00770 0.37 -1.2 74,352 - OLJFJH_00770 0.44 +1.4 74,352 - OLJFJH_00770 0.44 -1.2 74,355 + OLJFJH_00770 0.44 +1.2 74,355 + OLJFJH_00770 0.44 -0.7 74,355 + OLJFJH_00770 0.44 -0.3 74,364 - OLJFJH_00770 0.45 +0.4 74,462 - OLJFJH_00770 0.56 -0.7 74,594 + OLJFJH_00770 0.71 +1.7 74,594 + OLJFJH_00770 0.71 +1.9 74,595 - OLJFJH_00770 0.71 +2.3 74,628 + OLJFJH_00770 0.74 -1.1 74,629 - OLJFJH_00770 0.75 -1.0 74,759 + OLJFJH_00770 0.89 +0.4 74,760 - OLJFJH_00770 0.89 +0.3 74,790 + -1.9 74,790 + -0.7 74,793 + +2.7 74,793 + -0.2 74,794 - +1.1 74,794 - -0.1 74,823 + -0.5 74,823 + -0.7 74,824 - +1.2 74,824 - +0.2 74,863 - -2.2 74,888 + -0.2 75,196 + OLJFJH_00775 0.15 -1.1 75,431 + OLJFJH_00775 0.32 -2.3 75,431 + OLJFJH_00775 0.32 +0.2 75,431 + OLJFJH_00775 0.32 -1.2 75,709 + OLJFJH_00775 0.53 -0.4 75,709 + OLJFJH_00775 0.53 -0.8 75,709 + OLJFJH_00775 0.53 -3.5 75,709 + OLJFJH_00775 0.53 +0.3 75,709 + OLJFJH_00775 0.53 -2.2 75,718 + OLJFJH_00775 0.54 -2.2 75,731 + OLJFJH_00775 0.55 -0.7 75,793 + OLJFJH_00775 0.59 -1.9 75,793 + OLJFJH_00775 0.59 -2.7 75,947 + OLJFJH_00775 0.71 -1.0 75,947 + OLJFJH_00775 0.71 -1.9 75,950 + OLJFJH_00775 0.71 -2.4 76,021 + OLJFJH_00775 0.76 -1.9 76,021 + OLJFJH_00775 0.76 -4.1 76,111 + OLJFJH_00775 0.83 -3.0 76,111 + OLJFJH_00775 0.83 +0.0 76,800 + -2.8 76,819 + -0.8 76,862 + +2.0 76,896 - +0.5 76,949 + -0.9 76,950 - -0.7 77,051 - OLJFJH_00785 0.19 +0.1 77,097 + OLJFJH_00785 0.25 -0.0 77,098 - OLJFJH_00785 0.25 -0.4 77,160 - OLJFJH_00785 0.33 -0.5 77,160 - OLJFJH_00785 0.33 +0.9 77,167 - OLJFJH_00785 0.34 -0.2 77,167 - OLJFJH_00785 0.34 +0.2
Or see this region's nucleotide sequence