Experiment: Sew9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00762 and OHPLBJKB_00763 are separated by 7 nucleotides OHPLBJKB_00763 and OHPLBJKB_00764 overlap by 4 nucleotides OHPLBJKB_00764 and OHPLBJKB_00765 are separated by 17 nucleotides OHPLBJKB_00765 and OHPLBJKB_00766 are separated by 17 nucleotides
OHPLBJKB_00762: OHPLBJKB_00762 - dITP/XTP pyrophosphatase, at 784,709 to 785,302
_00762
OHPLBJKB_00763: OHPLBJKB_00763 - hypothetical protein, at 785,310 to 785,600
_00763
OHPLBJKB_00764: OHPLBJKB_00764 - hypothetical protein, at 785,597 to 786,163
_00764
OHPLBJKB_00765: OHPLBJKB_00765 - Pyridoxal phosphate homeostasis protein, at 786,181 to 786,885
_00765
OHPLBJKB_00766: OHPLBJKB_00766 - putative protein YggR, at 786,903 to 787,883
_00766
Position (kb) 786
787 Strain fitness (log2 ratio) -2
-1
0
1
2 at 785.302 kb on + strand at 785.303 kb on - strand at 785.303 kb on - strand at 785.307 kb on + strand at 785.308 kb on - strand at 785.311 kb on + strand at 785.311 kb on + strand at 785.311 kb on + strand at 785.312 kb on - strand at 785.312 kb on - strand at 785.312 kb on - strand at 785.312 kb on - strand at 785.312 kb on - strand at 785.312 kb on - strand at 785.315 kb on + strand at 785.315 kb on + strand at 785.316 kb on - strand at 785.319 kb on + strand at 785.320 kb on - strand at 785.400 kb on + strand, within OHPLBJKB_00763 at 785.400 kb on + strand, within OHPLBJKB_00763 at 785.401 kb on - strand, within OHPLBJKB_00763 at 785.401 kb on - strand, within OHPLBJKB_00763 at 785.401 kb on - strand, within OHPLBJKB_00763 at 785.499 kb on - strand, within OHPLBJKB_00763 at 785.515 kb on - strand, within OHPLBJKB_00763 at 785.525 kb on + strand, within OHPLBJKB_00763 at 785.525 kb on + strand, within OHPLBJKB_00763 at 785.525 kb on + strand, within OHPLBJKB_00763 at 785.526 kb on - strand, within OHPLBJKB_00763 at 785.552 kb on + strand, within OHPLBJKB_00763 at 785.552 kb on + strand, within OHPLBJKB_00763 at 785.552 kb on + strand, within OHPLBJKB_00763 at 785.553 kb on - strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.554 kb on + strand, within OHPLBJKB_00763 at 785.555 kb on - strand, within OHPLBJKB_00763 at 785.555 kb on - strand, within OHPLBJKB_00763 at 785.555 kb on - strand, within OHPLBJKB_00763 at 785.555 kb on - strand, within OHPLBJKB_00763 at 785.562 kb on + strand, within OHPLBJKB_00763 at 785.583 kb on - strand at 785.583 kb on - strand at 785.590 kb on - strand at 785.601 kb on - strand at 785.601 kb on - strand at 785.629 kb on + strand at 785.649 kb on - strand at 785.676 kb on + strand, within OHPLBJKB_00764 at 785.676 kb on + strand, within OHPLBJKB_00764 at 785.676 kb on + strand, within OHPLBJKB_00764 at 785.676 kb on + strand, within OHPLBJKB_00764 at 785.676 kb on + strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.677 kb on - strand, within OHPLBJKB_00764 at 785.781 kb on + strand, within OHPLBJKB_00764 at 785.781 kb on + strand, within OHPLBJKB_00764 at 785.782 kb on - strand, within OHPLBJKB_00764 at 785.795 kb on - strand, within OHPLBJKB_00764 at 785.953 kb on + strand, within OHPLBJKB_00764 at 785.954 kb on - strand, within OHPLBJKB_00764 at 785.955 kb on + strand, within OHPLBJKB_00764 at 785.955 kb on + strand, within OHPLBJKB_00764 at 785.955 kb on + strand, within OHPLBJKB_00764 at 785.956 kb on - strand, within OHPLBJKB_00764 at 785.956 kb on - strand, within OHPLBJKB_00764 at 786.036 kb on - strand, within OHPLBJKB_00764 at 786.045 kb on - strand, within OHPLBJKB_00764 at 786.045 kb on - strand, within OHPLBJKB_00764 at 786.101 kb on + strand, within OHPLBJKB_00764 at 786.101 kb on + strand, within OHPLBJKB_00764 at 786.104 kb on + strand, within OHPLBJKB_00764 at 786.119 kb on - strand at 786.120 kb on + strand at 786.120 kb on + strand at 786.120 kb on + strand at 786.120 kb on + strand at 786.121 kb on - strand at 786.121 kb on - strand at 786.121 kb on - strand at 786.157 kb on + strand at 786.158 kb on - strand at 786.189 kb on + strand at 786.240 kb on + strand at 786.241 kb on - strand at 786.241 kb on - strand at 786.241 kb on - strand at 786.331 kb on + strand, within OHPLBJKB_00765 at 786.364 kb on + strand, within OHPLBJKB_00765 at 786.364 kb on + strand, within OHPLBJKB_00765 at 786.364 kb on + strand, within OHPLBJKB_00765 at 786.364 kb on + strand, within OHPLBJKB_00765 at 786.364 kb on + strand, within OHPLBJKB_00765 at 786.365 kb on - strand, within OHPLBJKB_00765 at 786.365 kb on - strand, within OHPLBJKB_00765 at 786.369 kb on - strand, within OHPLBJKB_00765 at 786.369 kb on - strand, within OHPLBJKB_00765 at 786.369 kb on - strand, within OHPLBJKB_00765 at 786.369 kb on - strand, within OHPLBJKB_00765 at 786.369 kb on - strand, within OHPLBJKB_00765 at 786.413 kb on - strand, within OHPLBJKB_00765 at 786.422 kb on - strand, within OHPLBJKB_00765 at 786.478 kb on - strand, within OHPLBJKB_00765 at 786.582 kb on + strand, within OHPLBJKB_00765 at 786.582 kb on + strand, within OHPLBJKB_00765 at 786.582 kb on + strand, within OHPLBJKB_00765 at 786.583 kb on - strand, within OHPLBJKB_00765 at 786.621 kb on + strand, within OHPLBJKB_00765 at 786.622 kb on - strand, within OHPLBJKB_00765 at 786.624 kb on + strand, within OHPLBJKB_00765 at 786.655 kb on + strand, within OHPLBJKB_00765 at 786.655 kb on + strand, within OHPLBJKB_00765 at 786.656 kb on - strand, within OHPLBJKB_00765 at 786.656 kb on - strand, within OHPLBJKB_00765 at 786.693 kb on + strand, within OHPLBJKB_00765 at 786.693 kb on + strand, within OHPLBJKB_00765 at 786.693 kb on + strand, within OHPLBJKB_00765 at 786.693 kb on + strand, within OHPLBJKB_00765 at 786.697 kb on + strand, within OHPLBJKB_00765 at 786.697 kb on + strand, within OHPLBJKB_00765 at 786.698 kb on - strand, within OHPLBJKB_00765 at 786.713 kb on + strand, within OHPLBJKB_00765 at 786.714 kb on - strand, within OHPLBJKB_00765 at 786.714 kb on - strand, within OHPLBJKB_00765 at 786.714 kb on - strand, within OHPLBJKB_00765 at 786.799 kb on - strand, within OHPLBJKB_00765 at 786.876 kb on + strand at 786.899 kb on + strand at 786.899 kb on + strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.900 kb on - strand at 786.902 kb on + strand at 786.929 kb on + strand at 786.929 kb on + strand at 786.935 kb on - strand at 786.955 kb on + strand at 786.955 kb on + strand at 786.955 kb on + strand at 786.955 kb on + strand at 786.956 kb on - strand at 786.956 kb on - strand at 786.956 kb on - strand at 786.956 kb on - strand at 787.043 kb on - strand, within OHPLBJKB_00766 at 787.189 kb on + strand, within OHPLBJKB_00766 at 787.246 kb on + strand, within OHPLBJKB_00766 at 787.246 kb on + strand, within OHPLBJKB_00766 at 787.247 kb on - strand, within OHPLBJKB_00766 at 787.305 kb on - strand, within OHPLBJKB_00766 at 787.330 kb on - strand, within OHPLBJKB_00766 at 787.334 kb on + strand, within OHPLBJKB_00766 at 787.335 kb on - strand, within OHPLBJKB_00766 at 787.383 kb on + strand, within OHPLBJKB_00766 at 787.383 kb on + strand, within OHPLBJKB_00766 at 787.383 kb on + strand, within OHPLBJKB_00766 at 787.383 kb on + strand, within OHPLBJKB_00766 at 787.389 kb on + strand, within OHPLBJKB_00766 at 787.389 kb on + strand, within OHPLBJKB_00766 at 787.389 kb on + strand, within OHPLBJKB_00766 at 787.390 kb on - strand, within OHPLBJKB_00766 at 787.439 kb on + strand, within OHPLBJKB_00766 at 787.439 kb on + strand, within OHPLBJKB_00766 at 787.440 kb on - strand, within OHPLBJKB_00766 at 787.507 kb on + strand, within OHPLBJKB_00766 at 787.507 kb on + strand, within OHPLBJKB_00766 at 787.508 kb on - strand, within OHPLBJKB_00766 at 787.508 kb on - strand, within OHPLBJKB_00766 at 787.576 kb on + strand, within OHPLBJKB_00766 at 787.576 kb on + strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.577 kb on - strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.580 kb on + strand, within OHPLBJKB_00766 at 787.581 kb on - strand, within OHPLBJKB_00766 at 787.581 kb on - strand, within OHPLBJKB_00766 at 787.581 kb on - strand, within OHPLBJKB_00766 at 787.581 kb on - strand, within OHPLBJKB_00766 at 787.581 kb on - strand, within OHPLBJKB_00766 at 787.652 kb on + strand, within OHPLBJKB_00766 at 787.667 kb on + strand, within OHPLBJKB_00766 at 787.668 kb on - strand, within OHPLBJKB_00766 at 787.668 kb on - strand, within OHPLBJKB_00766 at 787.834 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sew9 remove 785,302 + -0.1 785,303 - -0.7 785,303 - +0.1 785,307 + -0.1 785,308 - -0.3 785,311 + +0.2 785,311 + -0.0 785,311 + -0.5 785,312 - +0.9 785,312 - -0.1 785,312 - +0.8 785,312 - -0.3 785,312 - -0.6 785,312 - +0.5 785,315 + -0.7 785,315 + -0.8 785,316 - +0.1 785,319 + -0.4 785,320 - +0.1 785,400 + OHPLBJKB_00763 0.31 +0.1 785,400 + OHPLBJKB_00763 0.31 -0.9 785,401 - OHPLBJKB_00763 0.31 -0.9 785,401 - OHPLBJKB_00763 0.31 +0.4 785,401 - OHPLBJKB_00763 0.31 +0.0 785,499 - OHPLBJKB_00763 0.65 -0.3 785,515 - OHPLBJKB_00763 0.70 +0.3 785,525 + OHPLBJKB_00763 0.74 -1.1 785,525 + OHPLBJKB_00763 0.74 -0.3 785,525 + OHPLBJKB_00763 0.74 +0.1 785,526 - OHPLBJKB_00763 0.74 +0.2 785,552 + OHPLBJKB_00763 0.83 +0.4 785,552 + OHPLBJKB_00763 0.83 +0.2 785,552 + OHPLBJKB_00763 0.83 +1.1 785,553 - OHPLBJKB_00763 0.84 -1.7 785,554 + OHPLBJKB_00763 0.84 +1.4 785,554 + OHPLBJKB_00763 0.84 -0.0 785,554 + OHPLBJKB_00763 0.84 +0.6 785,554 + OHPLBJKB_00763 0.84 -0.1 785,554 + OHPLBJKB_00763 0.84 +0.5 785,554 + OHPLBJKB_00763 0.84 +0.3 785,555 - OHPLBJKB_00763 0.84 -0.3 785,555 - OHPLBJKB_00763 0.84 -0.7 785,555 - OHPLBJKB_00763 0.84 -0.9 785,555 - OHPLBJKB_00763 0.84 -0.1 785,562 + OHPLBJKB_00763 0.87 +0.1 785,583 - -1.0 785,583 - -0.9 785,590 - +0.8 785,601 - -0.4 785,601 - -0.6 785,629 + -0.3 785,649 - +0.0 785,676 + OHPLBJKB_00764 0.14 -1.5 785,676 + OHPLBJKB_00764 0.14 +0.8 785,676 + OHPLBJKB_00764 0.14 +0.4 785,676 + OHPLBJKB_00764 0.14 -1.1 785,676 + OHPLBJKB_00764 0.14 -0.6 785,677 - OHPLBJKB_00764 0.14 +1.4 785,677 - OHPLBJKB_00764 0.14 -0.7 785,677 - OHPLBJKB_00764 0.14 +0.4 785,677 - OHPLBJKB_00764 0.14 +0.9 785,677 - OHPLBJKB_00764 0.14 -0.5 785,677 - OHPLBJKB_00764 0.14 +0.0 785,677 - OHPLBJKB_00764 0.14 +1.4 785,781 + OHPLBJKB_00764 0.32 +0.9 785,781 + OHPLBJKB_00764 0.32 -2.0 785,782 - OHPLBJKB_00764 0.33 +0.9 785,795 - OHPLBJKB_00764 0.35 -0.3 785,953 + OHPLBJKB_00764 0.63 +0.2 785,954 - OHPLBJKB_00764 0.63 -0.1 785,955 + OHPLBJKB_00764 0.63 -0.6 785,955 + OHPLBJKB_00764 0.63 +0.6 785,955 + OHPLBJKB_00764 0.63 +0.2 785,956 - OHPLBJKB_00764 0.63 +0.9 785,956 - OHPLBJKB_00764 0.63 +0.2 786,036 - OHPLBJKB_00764 0.77 +1.4 786,045 - OHPLBJKB_00764 0.79 -1.7 786,045 - OHPLBJKB_00764 0.79 +1.9 786,101 + OHPLBJKB_00764 0.89 +0.8 786,101 + OHPLBJKB_00764 0.89 +1.4 786,104 + OHPLBJKB_00764 0.89 -0.9 786,119 - -0.1 786,120 + -1.4 786,120 + -0.3 786,120 + -1.1 786,120 + +0.6 786,121 - +0.2 786,121 - +0.1 786,121 - +0.4 786,157 + +1.9 786,158 - +0.0 786,189 + -1.3 786,240 + +0.7 786,241 - +0.2 786,241 - +0.1 786,241 - -0.9 786,331 + OHPLBJKB_00765 0.21 -1.1 786,364 + OHPLBJKB_00765 0.26 -0.2 786,364 + OHPLBJKB_00765 0.26 +0.9 786,364 + OHPLBJKB_00765 0.26 +0.4 786,364 + OHPLBJKB_00765 0.26 +0.6 786,364 + OHPLBJKB_00765 0.26 -1.6 786,365 - OHPLBJKB_00765 0.26 +0.5 786,365 - OHPLBJKB_00765 0.26 +0.2 786,369 - OHPLBJKB_00765 0.27 -0.6 786,369 - OHPLBJKB_00765 0.27 +0.4 786,369 - OHPLBJKB_00765 0.27 +0.1 786,369 - OHPLBJKB_00765 0.27 +0.0 786,369 - OHPLBJKB_00765 0.27 -0.6 786,413 - OHPLBJKB_00765 0.33 -0.8 786,422 - OHPLBJKB_00765 0.34 -0.5 786,478 - OHPLBJKB_00765 0.42 -0.3 786,582 + OHPLBJKB_00765 0.57 -1.3 786,582 + OHPLBJKB_00765 0.57 -0.0 786,582 + OHPLBJKB_00765 0.57 +0.9 786,583 - OHPLBJKB_00765 0.57 -0.7 786,621 + OHPLBJKB_00765 0.62 +0.4 786,622 - OHPLBJKB_00765 0.63 +0.2 786,624 + OHPLBJKB_00765 0.63 -0.3 786,655 + OHPLBJKB_00765 0.67 +1.1 786,655 + OHPLBJKB_00765 0.67 +1.2 786,656 - OHPLBJKB_00765 0.67 -0.1 786,656 - OHPLBJKB_00765 0.67 -0.5 786,693 + OHPLBJKB_00765 0.73 +0.5 786,693 + OHPLBJKB_00765 0.73 -0.2 786,693 + OHPLBJKB_00765 0.73 -0.2 786,693 + OHPLBJKB_00765 0.73 -1.1 786,697 + OHPLBJKB_00765 0.73 +0.4 786,697 + OHPLBJKB_00765 0.73 +0.7 786,698 - OHPLBJKB_00765 0.73 -0.6 786,713 + OHPLBJKB_00765 0.75 +0.1 786,714 - OHPLBJKB_00765 0.76 -0.3 786,714 - OHPLBJKB_00765 0.76 +1.4 786,714 - OHPLBJKB_00765 0.76 -0.7 786,799 - OHPLBJKB_00765 0.88 +1.0 786,876 + +0.0 786,899 + +0.0 786,899 + -0.8 786,900 - -0.5 786,900 - -0.1 786,900 - +0.6 786,900 - -0.2 786,900 - +0.3 786,900 - -0.6 786,900 - +1.8 786,902 + +0.9 786,929 + +0.3 786,929 + +0.3 786,935 - +0.4 786,955 + -1.0 786,955 + +0.3 786,955 + +0.1 786,955 + -1.1 786,956 - -0.2 786,956 - -0.1 786,956 - -0.2 786,956 - -0.2 787,043 - OHPLBJKB_00766 0.14 -0.9 787,189 + OHPLBJKB_00766 0.29 -0.0 787,246 + OHPLBJKB_00766 0.35 -0.2 787,246 + OHPLBJKB_00766 0.35 -0.1 787,247 - OHPLBJKB_00766 0.35 -0.6 787,305 - OHPLBJKB_00766 0.41 -0.6 787,330 - OHPLBJKB_00766 0.44 -0.4 787,334 + OHPLBJKB_00766 0.44 +0.2 787,335 - OHPLBJKB_00766 0.44 +0.4 787,383 + OHPLBJKB_00766 0.49 +0.4 787,383 + OHPLBJKB_00766 0.49 -0.3 787,383 + OHPLBJKB_00766 0.49 +0.3 787,383 + OHPLBJKB_00766 0.49 +0.0 787,389 + OHPLBJKB_00766 0.50 -0.1 787,389 + OHPLBJKB_00766 0.50 -1.4 787,389 + OHPLBJKB_00766 0.50 -0.2 787,390 - OHPLBJKB_00766 0.50 +0.1 787,439 + OHPLBJKB_00766 0.55 +0.1 787,439 + OHPLBJKB_00766 0.55 +1.3 787,440 - OHPLBJKB_00766 0.55 +0.4 787,507 + OHPLBJKB_00766 0.62 +0.2 787,507 + OHPLBJKB_00766 0.62 -0.6 787,508 - OHPLBJKB_00766 0.62 +0.4 787,508 - OHPLBJKB_00766 0.62 +0.4 787,576 + OHPLBJKB_00766 0.69 -1.0 787,576 + OHPLBJKB_00766 0.69 +0.0 787,577 - OHPLBJKB_00766 0.69 -1.6 787,577 - OHPLBJKB_00766 0.69 -0.3 787,577 - OHPLBJKB_00766 0.69 -0.5 787,577 - OHPLBJKB_00766 0.69 +0.3 787,577 - OHPLBJKB_00766 0.69 +0.3 787,577 - OHPLBJKB_00766 0.69 -0.2 787,577 - OHPLBJKB_00766 0.69 +0.6 787,577 - OHPLBJKB_00766 0.69 +0.0 787,580 + OHPLBJKB_00766 0.69 +0.3 787,580 + OHPLBJKB_00766 0.69 -0.4 787,580 + OHPLBJKB_00766 0.69 -1.0 787,580 + OHPLBJKB_00766 0.69 +0.3 787,580 + OHPLBJKB_00766 0.69 -0.1 787,580 + OHPLBJKB_00766 0.69 +0.2 787,580 + OHPLBJKB_00766 0.69 -0.1 787,580 + OHPLBJKB_00766 0.69 -0.2 787,580 + OHPLBJKB_00766 0.69 +0.4 787,580 + OHPLBJKB_00766 0.69 -2.0 787,580 + OHPLBJKB_00766 0.69 -0.6 787,580 + OHPLBJKB_00766 0.69 -0.7 787,581 - OHPLBJKB_00766 0.69 -0.1 787,581 - OHPLBJKB_00766 0.69 -0.3 787,581 - OHPLBJKB_00766 0.69 +0.7 787,581 - OHPLBJKB_00766 0.69 +0.5 787,581 - OHPLBJKB_00766 0.69 -0.6 787,652 + OHPLBJKB_00766 0.76 +0.2 787,667 + OHPLBJKB_00766 0.78 +0.9 787,668 - OHPLBJKB_00766 0.78 -0.2 787,668 - OHPLBJKB_00766 0.78 -0.2 787,834 + +0.6
Or see this region's nucleotide sequence