Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF872

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
594,519	-				-0.4
594,591	-		GFF872	0.15	+0.1
594,645	+		GFF872	0.19	-0.5
594,938	+		GFF872	0.44	-0.2
595,074	-		GFF872	0.56	-0.1
595,074	-		GFF872	0.56	+0.3
595,128	-		GFF872	0.60	-0.6
595,128	-		GFF872	0.60	+0.3
595,128	-		GFF872	0.60	-0.3
595,555	-				-0.4
595,556	+				+0.5
595,556	+				+0.6
595,557	-				+0.6
595,557	-				-0.1
595,557	-				-0.1
595,718	+				-0.2
595,719	-				-1.0
595,905	+		GFF873	0.13	-0.1
595,906	-		GFF873	0.13	-0.4
596,076	+		GFF873	0.22	-0.7
596,076	+		GFF873	0.22	+0.1
596,288	-		GFF873	0.33	+0.0
596,575	-		GFF873	0.47	-0.1
596,575	-		GFF873	0.47	+0.4
596,575	-		GFF873	0.47	+0.1