Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF832

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
529,562	+				+0.2
529,562	+				-0.1
529,563	-				-0.1
529,563	-				+0.0
529,563	-				-0.7
529,599	+				-0.4
529,600	-				+0.1
529,608	+				-0.7
529,608	+				+0.2
529,608	+				-1.0
529,609	-				-0.1
529,609	-				-0.3
529,609	-				-0.1
529,642	+				+0.1
529,642	+				-0.4
529,642	+				+0.1
529,642	+				-0.0
529,643	-				+0.0
529,661	-				+2.2
529,685	+				+0.2
529,686	-				-1.4
529,686	-				-0.5
529,717	+				+0.5
529,717	+				-0.7
529,825	-				-0.7
529,914	+				-0.7
529,965	+				+0.5
529,965	+				-0.1
529,965	+				-0.2
529,966	-				+0.2
529,966	-				+0.7
529,966	-				+1.0
529,969	+				-0.2
529,969	+				-0.8
529,970	-				-0.2
530,016	-				+0.3
530,016	-				+1.1
530,016	-				-0.2
530,016	-				-1.2
530,016	-				-1.1
530,039	+				-0.3
530,040	-				-0.1
530,235	+				+0.5
530,235	+				+1.1
530,235	+				+1.5
530,236	-				-0.7
530,295	+				+1.3
530,295	+				-1.1
530,295	+				-0.1
530,295	+				-0.3
530,295	+				+0.1
530,296	-				+1.3
530,296	-				-0.2
530,383	-				+0.1
530,427	+				-0.1
530,427	+				-0.4
530,428	-				-0.6
530,428	-				+0.2
530,435	+				+2.5
530,436	-				+0.7
530,444	+				-1.4
530,445	-				+0.1
530,453	-				-0.7
530,453	-				+0.3
530,453	-				+0.5
530,671	-				+0.2
530,766	-		GFF832	0.17	-0.0
530,812	-		GFF832	0.21	-0.7
531,000	+		GFF832	0.36	+1.0
531,001	-		GFF832	0.36	-0.8
531,013	+		GFF832	0.37	-0.1
531,013	+		GFF832	0.37	+1.1
531,013	+		GFF832	0.37	-0.0
531,013	+		GFF832	0.37	+0.5
531,014	-		GFF832	0.37	-0.5
531,214	+		GFF832	0.53	+0.1
531,214	+		GFF832	0.53	+0.0
531,215	-		GFF832	0.53	-0.9
531,215	-		GFF832	0.53	-0.2
531,259	+		GFF832	0.56	+0.3
531,259	+		GFF832	0.56	-0.0
531,259	+		GFF832	0.56	+0.1
531,260	-		GFF832	0.56	+0.1
531,260	-		GFF832	0.56	+0.6
531,299	-		GFF832	0.59	-0.0
531,616	+		GFF832	0.85	-0.5
531,630	+		GFF832	0.86	+0.0
531,635	+		GFF832	0.86	+0.2
531,635	+		GFF832	0.86	-0.4
531,635	+		GFF832	0.86	+0.7
531,635	+		GFF832	0.86	-0.4
531,635	+		GFF832	0.86	-0.4
531,635	+		GFF832	0.86	-0.7
531,636	-		GFF832	0.86	-0.8
531,687	+				-0.6
531,767	+				-1.0
531,767	+				+0.2
531,767	+				+0.3
531,768	-				+0.1
531,806	+				-0.1
531,806	+				-0.7
531,807	-				-0.8
531,807	-				-0.1
531,807	-				-0.7
531,855	+				-0.5
531,855	+				-0.4
531,858	+				-0.1
531,859	-				+0.1
531,986	-		GFF833	0.68	+0.3
531,986	-		GFF833	0.68	-0.0
531,986	-		GFF833	0.68	-0.2
532,396	-				-0.0
532,539	+				+0.1
532,686	+				+0.3
532,686	+				+0.1
532,686	+				-0.1
532,686	+				+0.2
532,687	-				+0.9
532,780	+				+0.7
532,780	+				-0.1
532,780	+				+0.4
532,780	+				-1.3
532,780	+				-2.8
532,781	-				+0.3
532,796	+				+0.1
532,796	+				+0.9
532,796	+				-1.1
532,797	-				-0.2