Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5756

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,781,085	+		GFF5755	0.48	+0.7
2,781,646	+				-1.1
2,781,646	+				+1.3
2,782,345	+		GFF5756	0.77	+0.1
2,782,346	-		GFF5756	0.77	-0.2
2,782,728	-				-0.2
2,782,832	+		GFF5757	0.19	-0.1
2,782,961	+		GFF5757	0.43	+0.4
2,782,961	+		GFF5757	0.43	-0.2
2,782,962	-		GFF5757	0.43	+1.2
2,783,078	+		GFF5757	0.64	-1.1
2,783,079	-		GFF5757	0.64	+0.7
2,783,079	-		GFF5757	0.64	-0.1
2,783,133	-		GFF5757	0.74	-0.6
2,783,133	-		GFF5757	0.74	-0.0
2,783,162	+		GFF5757	0.79	-0.5
2,783,177	+		GFF5757	0.82	+0.4
2,783,201	+		GFF5757	0.87	-0.1
2,783,380	+		GFF5758	0.11	+0.5