Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5743

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,768,433	+		GFF5741	0.10	-1.5
2,768,434	-		GFF5741	0.10	+0.2
2,768,434	-		GFF5741	0.10	-0.1
2,768,435	-		GFF5741	0.11	+0.5
2,768,574	+		GFF5741	0.37	+1.2
2,768,574	+		GFF5741	0.37	+0.4
2,768,574	+		GFF5741	0.37	-0.3
2,768,574	+		GFF5741	0.37	-0.5
2,768,574	+		GFF5741	0.37	-0.3
2,768,575	-		GFF5741	0.37	-0.3
2,768,575	-		GFF5741	0.37	+1.3
2,768,575	-		GFF5741	0.37	+0.1
2,768,575	-		GFF5741	0.37	+0.0
2,768,575	-		GFF5741	0.37	-0.2
2,768,581	-		GFF5741	0.38	+0.0
2,768,637	+		GFF5741	0.49	-0.1
2,768,637	+		GFF5741	0.49	-0.3
2,768,637	+		GFF5741	0.49	-0.1
2,768,637	+		GFF5741	0.49	+0.6
2,768,637	+		GFF5741	0.49	-0.1
2,768,637	+		GFF5741	0.49	-1.3
2,768,637	+		GFF5741	0.49	-0.5
2,768,638	-		GFF5741	0.49	-0.4
2,768,638	-		GFF5741	0.49	-0.1
2,768,638	-		GFF5741	0.49	+0.2
2,768,638	-		GFF5741	0.49	+0.1
2,768,638	-		GFF5741	0.49	-0.6
2,768,638	-		GFF5741	0.49	-0.3
2,768,984	+		GFF5742	0.16	-3.7
2,768,985	-		GFF5742	0.16	-2.3
2,768,985	-		GFF5742	0.16	-1.5
2,769,471	+		GFF5743	0.11	+0.3
2,769,471	+		GFF5743	0.11	+0.4
2,769,472	-		GFF5743	0.11	-0.7
2,769,472	-		GFF5743	0.11	+0.2
2,770,110	+		GFF5743	0.78	+0.4
2,770,383	+				+0.4
2,770,384	-				+0.1
2,770,386	+				+0.1
2,770,386	+				+1.2
2,770,386	+				-0.3
2,770,387	-				+0.3
2,770,395	+				+0.9
2,770,452	+		GFF5744	0.18	-0.1
2,770,452	+		GFF5744	0.18	+0.1
2,770,453	-		GFF5744	0.18	+0.2
2,770,453	-		GFF5744	0.18	+0.6
2,770,453	-		GFF5744	0.18	-0.3
2,770,965	+		GFF5745	0.10	-0.6
2,771,185	+				-0.6
2,771,186	-				-0.5
2,771,221	+				-0.6
2,771,221	+				-0.8
2,771,221	+				-0.1