Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5616

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,632,610	+		GFF5614	0.48	+0.5
2,632,610	+		GFF5614	0.48	-0.3
2,632,611	-		GFF5614	0.49	+0.0
2,633,057	-				-0.7
2,633,057	-				-0.1
2,633,503	+		GFF5615	0.84	-0.7
2,634,141	-		GFF5616	0.47	-0.7
2,634,221	+		GFF5616	0.54	-0.1
2,634,221	+		GFF5616	0.54	+0.1
2,634,222	-		GFF5616	0.54	+0.1
2,634,222	-		GFF5616	0.54	+0.2
2,634,350	+		GFF5616	0.65	+0.2
2,634,350	+		GFF5616	0.65	-0.7
2,634,351	-		GFF5616	0.65	-0.5
2,634,351	-		GFF5616	0.65	-0.1
2,634,416	+		GFF5616	0.70	-0.1
2,634,882	-				+0.7
2,635,010	+		GFF5617	0.20	+0.5
2,635,011	-		GFF5617	0.20	+0.0
2,635,208	+		GFF5617	0.37	-0.3
2,635,209	-		GFF5617	0.37	-0.1
2,635,212	-		GFF5617	0.38	+0.9
2,635,415	+		GFF5617	0.55	+0.5
2,635,415	+		GFF5617	0.55	+0.2
2,635,416	-		GFF5617	0.55	-0.0
2,635,584	-		GFF5617	0.70	+0.5
2,635,674	-		GFF5617	0.77	+0.4