Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5489

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,490,798	+		GFF5488	0.41	-0.6
2,490,852	+		GFF5488	0.45	+1.0
2,490,852	+		GFF5488	0.45	-0.6
2,490,852	+		GFF5488	0.45	+0.7
2,490,852	+		GFF5488	0.45	-2.5
2,490,852	+		GFF5488	0.45	-0.3
2,490,853	-		GFF5488	0.45	+0.6
2,490,853	-		GFF5488	0.45	-0.6
2,490,873	+		GFF5488	0.47	-0.2
2,490,874	-		GFF5488	0.47	-0.7
2,490,874	-		GFF5488	0.47	-0.2
2,490,943	-		GFF5488	0.52	+0.1
2,491,032	+		GFF5488	0.59	+1.1
2,491,032	+		GFF5488	0.59	+0.2
2,491,032	+		GFF5488	0.59	-1.0
2,491,033	-		GFF5488	0.59	+0.8
2,491,033	-		GFF5488	0.59	+1.1
2,491,165	-		GFF5488	0.69	+1.1
2,491,206	+		GFF5488	0.72	+1.1
2,491,729	-				+0.6
2,492,173	-		GFF5489	0.40	+0.2
2,492,421	+		GFF5489	0.58	+0.6
2,493,412	+		GFF5490	0.29	+0.1
2,493,412	+		GFF5490	0.29	+1.0
2,493,412	+		GFF5490	0.29	-0.0
2,493,710	-		GFF5490	0.53	+1.4
2,493,817	+		GFF5490	0.62	+0.3
2,493,817	+		GFF5490	0.62	-0.6
2,493,817	+		GFF5490	0.62	+0.3
2,493,817	+		GFF5490	0.62	-0.0
2,493,818	-		GFF5490	0.62	+0.1
2,493,818	-		GFF5490	0.62	+0.0