Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5211

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
2,225,946	+		GFF5210	0.47	+0.5
2,225,950	+		GFF5210	0.47	+0.8
2,225,951	-		GFF5210	0.47	-0.6
2,226,275	+		GFF5210	0.67	-0.4
2,226,276	-		GFF5210	0.67	-0.2
2,226,395	+		GFF5210	0.74	-0.3
2,226,467	+		GFF5210	0.78	-1.0
2,226,528	-		GFF5210	0.82	+0.8
2,226,540	-		GFF5210	0.83	-0.6
2,226,611	+		GFF5210	0.87	-0.6
2,226,611	+		GFF5210	0.87	+1.5
2,226,612	-		GFF5210	0.87	+0.1
2,226,612	-		GFF5210	0.87	+0.1
2,226,821	+				-0.2
2,226,821	+				-0.0
2,226,821	+				+0.5
2,226,822	-				+0.8
2,226,822	-				-0.1
2,226,822	-				-0.1
2,227,119	-		GFF5211	0.35	+0.4
2,227,467	-				-0.1
2,227,600	-				-0.6
2,227,679	+				+0.2
2,227,680	-				-0.9
2,227,849	-				+0.1
2,228,080	+		GFF5213	0.28	-0.3