Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4974

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,991,949	-		GFF4973	0.57	+0.1
1,991,949	-		GFF4973	0.57	+0.8
1,992,224	+		GFF4973	0.75	+0.3
1,992,282	-		GFF4973	0.79	+1.0
1,992,282	-		GFF4973	0.79	-0.2
1,992,335	+		GFF4973	0.82	+0.8
1,992,409	-		GFF4973	0.87	-0.2
1,992,518	+				-0.1
1,992,518	+				+0.1
1,992,619	+				+0.0
1,992,620	-				+0.0
1,992,855	+		GFF4974	0.34	+0.8
1,992,976	-		GFF4974	0.81	-0.2
1,992,976	-		GFF4974	0.81	+0.3
1,993,121	+		GFF4975	0.14	+0.3
1,993,122	-		GFF4975	0.14	+0.1
1,993,122	-		GFF4975	0.14	+1.4
1,993,286	+		GFF4975	0.40	+0.4
1,993,286	+		GFF4975	0.40	+0.2
1,993,382	+		GFF4975	0.56	-0.4
1,993,529	+		GFF4975	0.79	-2.1
1,993,802	+		GFF4976	0.29	+0.2
1,994,023	+		GFF4976	0.77	-0.6
1,994,024	-		GFF4976	0.77	+0.1