Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4684

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,635,242	-		GFF4683	0.73	+0.8
1,635,242	-		GFF4683	0.73	+1.4
1,635,574	+		GFF4683	0.88	+0.1
1,635,575	-		GFF4683	0.88	+0.3
1,635,575	-		GFF4683	0.88	-0.7
1,635,575	-		GFF4683	0.88	-1.7
1,635,580	+		GFF4683	0.88	+0.2
1,635,620	-		GFF4683	0.89	-0.3
1,636,692	+				+0.0
1,636,693	-				-1.1
1,636,765	-		GFF4685	0.16	-0.2
1,636,765	-		GFF4685	0.16	-0.1
1,636,765	-		GFF4685	0.16	-0.1
1,636,906	-		GFF4685	0.33	+0.2