Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4583

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,526,330	-		GFF4582	0.63	+0.3
1,526,465	-		GFF4582	0.69	+0.6
1,526,526	+		GFF4582	0.71	+0.4
1,526,526	+		GFF4582	0.71	+0.4
1,526,526	+		GFF4582	0.71	-2.2
1,526,526	+		GFF4582	0.71	+0.4
1,526,527	-		GFF4582	0.71	-0.2
1,526,527	-		GFF4582	0.71	-0.0
1,526,527	-		GFF4582	0.71	-0.0
1,526,625	+		GFF4582	0.75	-0.4
1,526,808	+		GFF4582	0.83	+0.2
1,526,808	+		GFF4582	0.83	-0.1
1,526,808	+		GFF4582	0.83	-1.0
1,526,808	+		GFF4582	0.83	-0.4
1,526,808	+		GFF4582	0.83	-0.0
1,526,809	-		GFF4582	0.83	-0.2
1,526,928	+		GFF4582	0.87	+0.8
1,526,928	+		GFF4582	0.87	-0.5
1,526,928	+		GFF4582	0.87	+1.4
1,526,928	+		GFF4582	0.87	-0.5
1,526,928	+		GFF4582	0.87	-0.0
1,527,007	+				+0.3
1,527,117	+				-0.6
1,527,118	-				+0.3
1,527,213	+				+0.4
1,527,214	-				-0.4
1,527,218	+				+0.2
1,527,218	+				-1.8
1,527,218	+				-0.0
1,527,218	+				-0.2
1,527,218	+				-0.0
1,527,218	+				-0.4
1,527,219	-				+0.4
1,527,219	-				-0.1
1,527,219	-				+0.6
1,527,238	-				+1.2
1,527,399	+		GFF4583	0.14	-0.2
1,527,399	+		GFF4583	0.14	+1.6
1,527,418	-		GFF4583	0.16	-0.1
1,527,759	+		GFF4583	0.51	-1.4
1,527,759	+		GFF4583	0.51	-0.3
1,527,759	+		GFF4583	0.51	-1.3
1,527,759	+		GFF4583	0.51	-0.0
1,527,759	+		GFF4583	0.51	-0.0
1,527,759	+		GFF4583	0.51	-0.1
1,527,760	-		GFF4583	0.51	+0.8
1,527,760	-		GFF4583	0.51	-1.8
1,527,760	-		GFF4583	0.51	+0.1
1,527,760	-		GFF4583	0.51	-1.8
1,527,863	+		GFF4583	0.62	+0.6
1,527,864	+		GFF4583	0.62	-0.6
1,527,978	+		GFF4583	0.73	-0.1
1,527,978	+		GFF4583	0.73	-1.5
1,527,979	-		GFF4583	0.73	-0.4
1,528,036	-		GFF4583	0.79	-0.8
1,528,036	-		GFF4583	0.79	-1.2
1,528,337	+				-1.5
1,528,337	+				+0.9
1,528,619	+				+0.2
1,528,619	+				+0.7
1,528,619	+				+1.6
1,528,619	+				-0.6
1,528,619	+				-0.3
1,528,620	-				+0.0
1,528,620	-				-0.8
1,528,620	-				-0.7
1,528,757	+		GFF4584	0.17	+0.8
1,528,758	-		GFF4584	0.17	+0.1
1,528,994	+		GFF4584	0.31	-0.0
1,528,995	-		GFF4584	0.31	+0.5
1,528,995	-		GFF4584	0.31	-0.3
1,528,995	-		GFF4584	0.31	-0.0