Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4355

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,283,008	+				-0.4
1,283,008	+				-2.2
1,283,008	+				-0.8
1,283,008	+				+1.6
1,283,008	+				+0.5
1,283,008	+				-0.1
1,283,008	+				-1.3
1,283,009	-				-0.2
1,283,009	-				-0.6
1,283,009	-				+0.5
1,283,009	-				+0.6
1,283,009	-				-0.2
1,283,009	-				-0.2
1,283,026	-				-0.1
1,283,026	-				-0.8
1,283,026	-				-0.3
1,283,356	+		GFF4353	0.74	-0.2
1,283,356	+		GFF4353	0.74	-0.2
1,283,356	+		GFF4353	0.74	+0.3
1,283,356	+		GFF4353	0.74	-1.0
1,283,356	+		GFF4353	0.74	-0.0
1,283,356	+		GFF4353	0.74	+0.0
1,283,357	-		GFF4353	0.74	+0.4
1,283,357	-		GFF4353	0.74	-0.4
1,283,357	-		GFF4353	0.74	-0.4
1,283,357	-		GFF4353	0.74	-0.3
1,283,357	-		GFF4353	0.74	+0.3
1,283,458	+				-0.2
1,283,458	+				+0.4
1,283,458	+				+0.1
1,283,458	+				+0.3
1,283,458	+				-1.0
1,283,459	-				+0.4
1,283,459	-				+0.4
1,283,459	-				-0.3
1,284,044	-		GFF4355	0.44	+0.7
1,284,386	-				+0.7
1,284,519	+				+0.2
1,284,519	+				+0.4