Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3166

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
43,143	-		GFF3165	0.56	-0.2
43,409	+		GFF3165	0.82	-0.1
43,470	-		GFF3165	0.87	+0.4
43,615	-				+0.2
44,091	+		GFF3166	0.20	+1.2
44,092	-		GFF3166	0.20	+0.1
44,422	+		GFF3166	0.53	-0.1
44,710	+		GFF3166	0.81	+0.6
44,711	-		GFF3166	0.81	+0.6
44,711	-		GFF3166	0.81	-0.1
44,737	+		GFF3166	0.84	-0.1
44,797	-				-0.9
45,014	+				-2.6
45,686	+		GFF3167	0.49	-0.2
45,686	+		GFF3167	0.49	-0.7
45,687	-		GFF3167	0.49	+0.1
45,687	-		GFF3167	0.49	+0.6
45,687	-		GFF3167	0.49	+1.4
45,879	-		GFF3167	0.61	-0.0
45,879	-		GFF3167	0.61	-0.8