Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2933

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
15,673	+				-0.8
15,673	+				-0.0
15,674	-				+0.0
15,674	-				+0.7
15,674	-				+0.2
15,707	+		GFF2932	0.13	+1.2
15,708	-		GFF2932	0.13	-0.3
15,708	-		GFF2932	0.13	+0.1
15,708	-		GFF2932	0.13	-0.2
16,007	+		GFF2932	0.45	+0.3
16,007	+		GFF2932	0.45	-1.3
16,008	-		GFF2932	0.45	-1.2
16,008	-		GFF2932	0.45	+0.2
16,008	-		GFF2932	0.45	-0.1
16,008	-		GFF2932	0.45	+0.7
16,008	-		GFF2932	0.45	-1.0
16,008	-		GFF2932	0.45	-0.2
16,008	-		GFF2932	0.45	-0.3
16,008	-		GFF2932	0.45	+0.6
16,274	+		GFF2932	0.73	+0.3
16,274	+		GFF2932	0.73	-0.1
16,274	+		GFF2932	0.73	+0.3
16,274	+		GFF2932	0.73	-0.4
16,274	+		GFF2932	0.73	+0.5
16,274	+		GFF2932	0.73	-0.0
16,274	+		GFF2932	0.73	-1.5
16,274	+		GFF2932	0.73	+0.3
16,274	+		GFF2932	0.73	-0.3
16,274	+		GFF2932	0.73	-0.6
16,274	+		GFF2932	0.73	-2.0
16,274	+		GFF2932	0.73	-1.0
16,275	-		GFF2932	0.73	-0.2
16,275	-		GFF2932	0.73	-0.3
16,275	-		GFF2932	0.73	-0.6
16,275	-		GFF2932	0.73	-0.0
16,275	-		GFF2932	0.73	+0.6
16,275	-		GFF2932	0.73	-0.0
16,275	-		GFF2932	0.73	+0.5
16,275	-		GFF2932	0.73	-1.0
16,275	-		GFF2932	0.73	-1.0
16,277	+		GFF2932	0.73	-0.6
16,277	+		GFF2932	0.73	-1.0
16,277	+		GFF2932	0.73	+0.1
16,277	+		GFF2932	0.73	-0.3
16,277	+		GFF2932	0.73	+0.1
16,277	+		GFF2932	0.73	+0.2
16,277	+		GFF2932	0.73	+0.4
16,277	+		GFF2932	0.73	+0.1
16,277	+		GFF2932	0.73	+0.5
16,277	+		GFF2932	0.73	-0.3
16,278	-		GFF2932	0.73	-0.2
16,278	-		GFF2932	0.73	+1.3
16,278	-		GFF2932	0.73	-0.9
16,278	-		GFF2932	0.73	+0.0
16,278	-		GFF2932	0.73	+0.1
16,278	-		GFF2932	0.73	+0.2
16,391	+		GFF2932	0.85	-0.3
16,392	-		GFF2932	0.85	+0.4
16,392	-		GFF2932	0.85	-0.3
16,392	-		GFF2932	0.85	-0.9
16,401	-		GFF2932	0.86	-0.0
16,401	-		GFF2932	0.86	-0.4
16,574	+				+1.0
16,574	+				-0.0
16,575	-				+0.3
16,575	-				+0.5
16,693	-				-0.1
17,037	+		GFF2933	0.58	+0.2
17,037	+		GFF2933	0.58	+0.1
17,037	+		GFF2933	0.58	+0.1
17,037	+		GFF2933	0.58	-0.6
17,037	+		GFF2933	0.58	-0.6
17,037	+		GFF2933	0.58	+1.4
17,038	-		GFF2933	0.58	+0.3
17,038	-		GFF2933	0.58	-0.2
17,038	-		GFF2933	0.58	-0.0
17,289	+				-0.0
17,289	+				+1.3
17,289	+				-0.8
17,290	-				+0.5