Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2165

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
1,055,691	-				+0.4
1,055,738	+				+0.1
1,056,443	-				-0.5
1,056,589	+				-0.2
1,056,590	-				+0.6
1,056,590	-				+0.7
1,056,755	-		GFF2165	0.21	+0.3
1,056,806	-		GFF2165	0.25	+0.2
1,057,090	+		GFF2165	0.48	+0.1
1,057,091	-		GFF2165	0.48	-0.7
1,057,091	-		GFF2165	0.48	-0.5
1,057,108	+		GFF2165	0.49	-0.2
1,057,156	+		GFF2165	0.53	-0.0
1,057,175	-		GFF2165	0.55	+0.3
1,057,175	-		GFF2165	0.55	-0.0
1,057,175	-		GFF2165	0.55	+0.1
1,057,175	-		GFF2165	0.55	+0.2
1,057,283	-		GFF2165	0.63	-0.7
1,057,345	+		GFF2165	0.68	+0.2
1,057,346	-		GFF2165	0.68	-0.0
1,057,346	-		GFF2165	0.68	-0.0
1,057,763	-				+0.4
1,057,787	-				-0.2
1,058,548	+		GFF2166	0.72	-0.2