Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1495

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
343,575	+		GFF1494	0.43	-1.6
343,576	-		GFF1494	0.43	+0.9
343,576	-		GFF1494	0.43	+0.2
344,270	+				+0.0
344,270	+				+0.7
344,270	+				+0.0
344,270	+				+0.5
344,271	-				-0.8
344,271	-				-0.4
344,272	+				-0.6
344,325	+				+0.5
344,386	+				+0.1
344,387	-				+0.1
344,387	-				-0.5
344,388	+				-0.5
344,878	+		GFF1495	0.48	+0.8
344,879	-		GFF1495	0.48	+0.9
345,675	+		GFF1496	0.30	+0.1
346,077	+		GFF1496	0.71	+0.5
346,159	-		GFF1496	0.80	-0.2