Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1049

Experiment: Ying_Others16 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 3
786,990	+		GFF1048	0.30	-0.5
786,994	+		GFF1048	0.30	-1.1
787,396	+		GFF1048	0.64	+0.3
787,594	+		GFF1048	0.81	+0.1
787,595	-		GFF1048	0.81	-0.4
787,708	+				-0.6
787,853	+				+0.1
787,853	+				-0.1
787,874	+				-0.1
787,929	-		GFF1049	0.22	+1.3
787,929	-		GFF1049	0.22	-1.2
788,201	-		GFF1049	0.82	+0.7
788,287	+				-0.2
788,288	-				-0.1
788,288	-				-0.6
788,687	+				+0.4
788,743	+				+0.2
788,744	-				-0.4
788,876	+				+0.7
788,877	-				-0.5
788,877	-				-0.0
788,877	-				+0.3
788,980	+				-0.1