Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5671

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
2,694,008	+				-0.4
2,694,030	-				-0.5
2,694,030	-				-0.7
2,694,108	-		GFF5670	0.21	-0.1
2,694,375	-		GFF5670	0.76	+0.0
2,694,447	-				+0.1
2,694,670	+		GFF5671	0.13	+0.1
2,694,670	+		GFF5671	0.13	+0.3
2,695,382	-		GFF5671	0.68	+0.3
2,695,628	-		GFF5671	0.87	-1.3
2,695,628	-		GFF5671	0.87	-2.5
2,695,628	-		GFF5671	0.87	-0.7
2,696,072	+		GFF5672	0.48	-0.4
2,696,308	+				+0.0
2,696,580	-		GFF5673	0.45	+0.2
2,696,603	+		GFF5673	0.53	-0.1