Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5566

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
2,576,510	+				-0.9
2,576,523	+				-0.7
2,576,523	+				-0.7
2,577,462	+				-0.7
2,577,462	+				-1.7
2,577,663	+		GFF5566	0.17	-2.1
2,577,981	+		GFF5566	0.45	-2.7
2,578,369	-		GFF5566	0.80	-2.9
2,578,591	-				-0.8
2,579,142	-				+0.0
2,579,183	-				+0.1
2,579,462	+		GFF5568	0.53	-0.3
2,579,463	-		GFF5568	0.53	+0.2