Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5559

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
2,567,988	+		GFF5558	0.17	-0.6
2,567,989	-		GFF5558	0.17	-0.3
2,568,021	+		GFF5558	0.20	+0.7
2,568,021	+		GFF5558	0.20	-1.4
2,568,021	+		GFF5558	0.20	-0.3
2,568,021	+		GFF5558	0.20	+0.5
2,568,021	+		GFF5558	0.20	-0.3
2,568,021	+		GFF5558	0.20	+0.2
2,568,021	+		GFF5558	0.20	-0.2
2,568,022	-		GFF5558	0.20	+0.9
2,568,022	-		GFF5558	0.20	-0.3
2,568,037	-		GFF5558	0.21	+0.2
2,568,195	+		GFF5558	0.35	-1.1
2,568,255	+		GFF5558	0.41	+0.3
2,568,255	+		GFF5558	0.41	-0.1
2,568,276	+		GFF5558	0.43	-0.1
2,568,306	+		GFF5558	0.45	-0.1
2,568,306	+		GFF5558	0.45	-0.3
2,568,306	+		GFF5558	0.45	+0.0
2,568,307	-		GFF5558	0.45	-0.1
2,568,396	+		GFF5558	0.53	-0.9
2,568,396	+		GFF5558	0.53	-0.3
2,568,396	+		GFF5558	0.53	+0.5
2,568,397	-		GFF5558	0.54	+1.2
2,568,672	+		GFF5558	0.78	+0.2
2,568,673	-		GFF5558	0.79	+0.9
2,568,673	-		GFF5558	0.79	+0.3
2,568,756	+		GFF5558	0.86	-0.3
2,568,757	-		GFF5558	0.86	+0.0
2,568,873	+				+0.5
2,569,505	-		GFF5559	0.25	-1.4
2,569,505	-		GFF5559	0.25	-1.6
2,569,567	+		GFF5559	0.28	-1.1
2,569,568	-		GFF5559	0.28	-1.4
2,570,972	-		GFF5559	0.87	-1.4
2,571,100	+				-1.4
2,571,100	+				-1.1
2,571,187	+				-1.4
2,571,202	+				-2.2
2,571,287	-				-0.9
2,571,814	+		GFF5560	0.47	-0.6
2,571,815	-		GFF5560	0.47	+1.3
2,572,064	+		GFF5560	0.70	+1.5
2,572,064	+		GFF5560	0.70	+0.7
2,572,065	-		GFF5560	0.70	-0.1
2,572,181	-		GFF5560	0.80	-0.0