Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5420

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
2,421,388	-		GFF5419	0.58	-1.7
2,421,995	+		GFF5420	0.12	-1.6
2,421,995	+		GFF5420	0.12	-2.9
2,421,996	-		GFF5420	0.12	-2.4
2,422,398	-		GFF5420	0.53	-1.5
2,422,523	+		GFF5420	0.66	-2.3
2,422,523	+		GFF5420	0.66	-1.4
2,422,523	+		GFF5420	0.66	-1.6
2,422,524	-		GFF5420	0.66	-2.6
2,422,524	-		GFF5420	0.66	-1.2
2,422,649	+		GFF5420	0.79	-2.0
2,422,649	+		GFF5420	0.79	-1.6
2,422,649	+		GFF5420	0.79	-1.9
2,422,743	-		GFF5420	0.89	-2.0
2,422,772	+				-2.0
2,422,772	+				-1.9
2,422,772	+				-1.9
2,422,772	+				-1.0
2,422,772	+				-1.2
2,422,772	+				-1.7
2,423,835	-		GFF5421	0.75	-0.4