Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4797

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,809,096	+		GFF4796	0.61	-0.1
1,809,097	-		GFF4796	0.61	-0.5
1,809,105	+		GFF4796	0.61	+0.3
1,809,105	+		GFF4796	0.61	-1.9
1,809,105	+		GFF4796	0.61	-0.1
1,809,106	-		GFF4796	0.61	+2.0
1,809,106	-		GFF4796	0.61	-0.3
1,809,106	-		GFF4796	0.61	+0.0
1,809,106	-		GFF4796	0.61	-0.3
1,809,611	-				+0.5
1,809,614	+				-1.5
1,809,950	+		GFF4797	0.19	-0.0
1,809,950	+		GFF4797	0.19	-0.6
1,809,950	+		GFF4797	0.19	-1.5
1,809,950	+		GFF4797	0.19	-1.8
1,809,951	-		GFF4797	0.19	-2.0
1,809,951	-		GFF4797	0.19	-0.0
1,809,956	+		GFF4797	0.20	-1.3
1,809,956	+		GFF4797	0.20	-0.4
1,809,956	+		GFF4797	0.20	+0.4
1,809,957	-		GFF4797	0.20	-1.4
1,809,957	-		GFF4797	0.20	-1.3
1,810,041	-		GFF4797	0.24	-1.2
1,810,064	+		GFF4797	0.25	-1.6
1,810,064	+		GFF4797	0.25	-1.4
1,810,064	+		GFF4797	0.25	-0.7
1,810,067	+		GFF4797	0.26	-1.4
1,810,068	-		GFF4797	0.26	-0.0
1,810,103	+		GFF4797	0.28	-1.5
1,810,104	-		GFF4797	0.28	-1.6
1,810,142	+		GFF4797	0.30	-1.4
1,810,142	+		GFF4797	0.30	-2.2
1,810,142	+		GFF4797	0.30	-1.4
1,810,143	-		GFF4797	0.30	-0.6
1,810,157	+		GFF4797	0.30	-1.4
1,810,157	+		GFF4797	0.30	-1.1
1,810,157	+		GFF4797	0.30	-0.9
1,810,568	+		GFF4797	0.53	-2.4
1,810,608	-		GFF4797	0.55	-0.0
1,810,608	-		GFF4797	0.55	-0.9
1,810,652	+		GFF4797	0.57	-2.4
1,810,652	+		GFF4797	0.57	-1.2
1,810,676	+		GFF4797	0.59	-0.0
1,810,676	+		GFF4797	0.59	-1.6
1,810,677	-		GFF4797	0.59	-1.7
1,810,677	-		GFF4797	0.59	-1.6
1,811,120	+		GFF4797	0.83	-1.1
1,811,451	-				-1.4
1,811,451	-				+0.4
1,811,451	-				+0.4
1,811,451	-				+1.1
1,811,469	+				-0.5
1,811,470	-				-0.3
1,811,470	-				+0.4
1,811,470	-				-0.2
1,811,470	-				-1.4
1,811,470	-				+1.0
1,811,522	-				+0.8
1,811,574	+				-0.6
1,811,574	+				+0.6
1,811,574	+				-0.2
1,811,575	-				-0.2
1,811,598	+				+0.2
1,811,598	+				-0.9
1,811,598	+				-1.4
1,811,598	+				-0.3
1,811,598	+				+0.4
1,811,599	-				+0.2
1,811,599	-				+1.1
1,811,599	-				+0.0
1,811,599	-				+0.5
1,811,599	-				-1.0
1,811,599	-				-0.0
1,811,679	+				-0.0
1,811,679	+				+0.6
1,811,679	+				+0.3
1,811,709	+				+1.0
1,811,709	+				+0.1
1,811,710	-				+1.0
1,811,710	-				+0.6
1,811,989	+		GFF4798	0.26	-0.5