Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4683

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,632,690	-		GFF4682	0.12	+0.2
1,632,716	+		GFF4682	0.15	+1.2
1,632,717	-		GFF4682	0.15	+0.2
1,632,717	-		GFF4682	0.15	+1.4
1,632,953	+		GFF4682	0.39	+0.4
1,632,954	-		GFF4682	0.39	-0.2
1,632,954	-		GFF4682	0.39	-0.4
1,632,954	-		GFF4682	0.39	-0.3
1,632,954	-		GFF4682	0.39	+0.4
1,632,954	-		GFF4682	0.39	-0.0
1,632,954	-		GFF4682	0.39	-0.0
1,633,125	-		GFF4682	0.57	+0.2
1,633,125	-		GFF4682	0.57	+0.0
1,633,337	+		GFF4682	0.78	+0.1
1,633,337	+		GFF4682	0.78	-0.8
1,633,338	-		GFF4682	0.78	+0.3
1,633,637	-				+0.2
1,633,859	-		GFF4683	0.13	-0.5
1,633,859	-		GFF4683	0.13	-0.1
1,633,954	+		GFF4683	0.17	-0.0
1,634,029	+		GFF4683	0.20	-0.5
1,634,029	+		GFF4683	0.20	-0.3
1,634,029	+		GFF4683	0.20	-0.5
1,634,030	-		GFF4683	0.20	-0.4
1,634,032	+		GFF4683	0.21	-0.2
1,634,089	+		GFF4683	0.23	-0.4
1,634,320	+		GFF4683	0.33	-0.4
1,634,638	+		GFF4683	0.47	+0.0
1,634,638	+		GFF4683	0.47	-0.1
1,634,639	-		GFF4683	0.47	-0.6
1,634,639	-		GFF4683	0.47	-0.0
1,634,824	-		GFF4683	0.55	+0.5
1,634,824	-		GFF4683	0.55	+0.2
1,635,242	-		GFF4683	0.73	+0.5
1,635,242	-		GFF4683	0.73	+1.0
1,635,574	+		GFF4683	0.88	+0.3
1,635,575	-		GFF4683	0.88	-0.0
1,635,575	-		GFF4683	0.88	+0.5
1,635,575	-		GFF4683	0.88	-1.6
1,635,580	+		GFF4683	0.88	-0.6
1,635,620	-		GFF4683	0.89	+0.4
1,636,692	+				-0.2
1,636,693	-				-0.5
1,636,765	-		GFF4685	0.16	+0.5
1,636,765	-		GFF4685	0.16	-0.7
1,636,765	-		GFF4685	0.16	-0.1