Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4523

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,450,285	-		GFF4522	0.42	-1.2
1,450,473	+		GFF4522	0.55	-1.7
1,450,473	+		GFF4522	0.55	+1.4
1,450,473	+		GFF4522	0.55	+0.2
1,450,473	+		GFF4522	0.55	+0.6
1,450,474	-		GFF4522	0.55	-1.6
1,450,474	-		GFF4522	0.55	+0.5
1,450,474	-		GFF4522	0.55	-1.1
1,450,474	-		GFF4522	0.55	+2.0
1,450,660	-		GFF4522	0.67	+0.4
1,451,214	-				+0.0
1,451,227	+				+1.0
1,451,228	-				-0.4
1,451,228	-				-0.9
1,451,228	-				-0.5
1,451,230	+				+0.3
1,451,230	+				+0.5
1,451,230	+				-0.1
1,451,230	+				+0.1
1,451,230	+				-0.1
1,451,230	+				-0.0
1,451,230	+				-0.3
1,451,230	+				-0.9
1,451,231	-				-0.5
1,451,231	-				-0.4
1,451,466	+		GFF4523	0.28	-1.4
1,451,466	+		GFF4523	0.28	-1.6
1,451,466	+		GFF4523	0.28	-0.0
1,451,466	+		GFF4523	0.28	-1.7
1,451,467	-		GFF4523	0.28	-2.2
1,451,467	-		GFF4523	0.28	-2.1
1,451,467	-		GFF4523	0.28	-0.3
1,451,467	-		GFF4523	0.28	-1.7
1,451,467	-		GFF4523	0.28	-1.4
1,451,523	+		GFF4523	0.36	-1.2
1,451,524	-		GFF4523	0.36	-0.8
1,451,622	+		GFF4523	0.49	-0.5
1,451,622	+		GFF4523	0.49	-1.4
1,451,623	-		GFF4523	0.49	-1.4
1,451,623	-		GFF4523	0.49	+0.4
1,451,699	+		GFF4523	0.60	-1.0
1,451,699	+		GFF4523	0.60	-2.0
1,451,700	-		GFF4523	0.60	-2.4