Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4492

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,417,004	+				+0.9
1,417,005	-				+0.1
1,417,037	+				-0.9
1,417,038	-				+0.9
1,417,044	-				+0.1
1,417,063	+				+0.4
1,417,063	+				-0.3
1,417,063	+				+0.7
1,417,064	-				-0.3
1,417,064	-				+0.9
1,417,075	+				-0.1
1,417,075	+				+0.3
1,417,167	+		GFF4491	0.20	-0.1
1,417,167	+		GFF4491	0.20	+0.7
1,417,167	+		GFF4491	0.20	-0.1
1,417,168	-		GFF4491	0.20	-0.4
1,417,276	+		GFF4491	0.43	+0.6
1,417,276	+		GFF4491	0.43	+0.5
1,417,277	-		GFF4491	0.43	+1.2
1,417,294	+		GFF4491	0.46	-1.4
1,417,294	+		GFF4491	0.46	-0.1
1,417,295	-		GFF4491	0.47	+1.9
1,417,295	-		GFF4491	0.47	-0.6
1,417,295	-		GFF4491	0.47	+0.9
1,417,295	-		GFF4491	0.47	+0.5
1,417,295	-		GFF4491	0.47	+0.1
1,417,295	-		GFF4491	0.47	+0.0
1,417,295	-		GFF4491	0.47	+0.2
1,417,295	-		GFF4491	0.47	+0.0
1,417,295	-		GFF4491	0.47	+0.1
1,417,321	+		GFF4491	0.52	-0.4
1,417,321	+		GFF4491	0.52	-0.6
1,417,321	+		GFF4491	0.52	-0.3
1,417,322	-		GFF4491	0.52	+0.1
1,417,374	+		GFF4491	0.63	+0.0
1,417,381	+		GFF4491	0.65	+0.2
1,417,381	+		GFF4491	0.65	-0.2
1,417,381	+		GFF4491	0.65	-0.4
1,417,567	-				+0.4
1,417,567	-				-0.1
1,417,597	-				+0.1
1,417,709	-				+0.3
1,417,889	+				+0.9
1,417,890	-				+0.7
1,417,890	-				+0.0
1,418,096	+		GFF4492	0.31	+0.2
1,418,096	+		GFF4492	0.31	-0.4
1,418,096	+		GFF4492	0.31	-0.4
1,418,096	+		GFF4492	0.31	-0.9
1,418,097	-		GFF4492	0.31	+0.6
1,418,097	-		GFF4492	0.31	+0.4
1,418,097	-		GFF4492	0.31	+0.2
1,418,097	-		GFF4492	0.31	+1.7
1,418,150	+		GFF4492	0.39	-0.3
1,418,150	+		GFF4492	0.39	-0.0
1,418,150	+		GFF4492	0.39	+0.4
1,418,150	+		GFF4492	0.39	+0.0
1,418,150	+		GFF4492	0.39	-0.6
1,418,151	-		GFF4492	0.39	+1.4
1,418,151	-		GFF4492	0.39	-0.1
1,418,151	-		GFF4492	0.39	+1.3
1,418,151	-		GFF4492	0.39	+0.2
1,418,174	+		GFF4492	0.42	-0.2
1,418,175	-		GFF4492	0.42	-0.2
1,418,190	-		GFF4492	0.45	+0.2
1,418,190	-		GFF4492	0.45	+0.4
1,418,211	-		GFF4492	0.48	+1.1
1,418,282	-		GFF4492	0.58	+0.4
1,418,339	+		GFF4492	0.66	-1.1
1,418,339	+		GFF4492	0.66	-0.1
1,418,339	+		GFF4492	0.66	+0.1
1,418,446	+		GFF4492	0.81	+0.9
1,418,567	+				-0.1
1,418,568	-				-1.1
1,418,568	-				+0.8
1,418,809	+		GFF4493	0.11	-2.3
1,418,810	-		GFF4493	0.11	-1.2
1,418,956	+		GFF4493	0.23	-1.4
1,418,956	+		GFF4493	0.23	-0.3
1,418,956	+		GFF4493	0.23	-2.3
1,418,956	+		GFF4493	0.23	+1.2
1,419,262	+		GFF4493	0.47	-1.1
1,419,262	+		GFF4493	0.47	-0.1
1,419,263	-		GFF4493	0.47	+0.9
1,419,379	+		GFF4493	0.56	-1.2
1,419,380	-		GFF4493	0.56	-0.1
1,419,380	-		GFF4493	0.56	-0.9
1,419,439	+		GFF4493	0.61	-2.1
1,419,439	+		GFF4493	0.61	-0.9
1,419,439	+		GFF4493	0.61	-1.7
1,419,440	-		GFF4493	0.61	-2.2
1,419,440	-		GFF4493	0.61	-0.6
1,419,440	-		GFF4493	0.61	-0.4
1,419,440	-		GFF4493	0.61	-2.0