Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4278

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,202,154	+		GFF4276	0.87	-0.0
1,202,380	-				-2.1
1,202,380	-				-2.6
1,202,380	-				-3.3
1,202,436	+				-0.0
1,202,436	+				-0.0
1,202,436	+				+0.1
1,202,436	+				+0.2
1,202,437	-				-0.6
1,202,437	-				-1.9
1,202,437	-				-2.0
1,202,437	-				-1.4
1,202,437	-				-2.5
1,202,437	-				-1.0
1,202,437	-				-0.0
1,202,437	-				-1.7
1,202,437	-				-3.0
1,202,459	+				-0.5
1,202,460	-				-1.6
1,202,580	+		GFF4277	0.16	-5.0
1,202,580	+		GFF4277	0.16	-1.4
1,202,580	+		GFF4277	0.16	-3.0
1,202,580	+		GFF4277	0.16	-4.5
1,202,581	-		GFF4277	0.17	-1.4
1,202,740	-		GFF4277	0.49	+1.2
1,202,740	-		GFF4277	0.49	+0.5
1,202,856	+		GFF4277	0.73	+1.1
1,202,856	+		GFF4277	0.73	+0.9
1,202,856	+		GFF4277	0.73	+0.5
1,202,857	-		GFF4277	0.73	+0.3
1,202,857	-		GFF4277	0.73	+0.8
1,202,857	-		GFF4277	0.73	+0.9
1,204,222	+				-0.5
1,204,222	+				+0.4
1,204,223	-				-0.4
1,204,238	+				+0.6
1,204,238	+				-1.6
1,204,238	+				-0.1
1,204,238	+				-0.0
1,204,238	+				+0.1
1,204,238	+				+0.4
1,204,238	+				+1.2
1,204,239	-				-0.1
1,204,239	-				+0.5
1,204,239	-				+0.4
1,204,239	-				-0.7
1,204,239	-				+1.1
1,204,239	-				-0.0
1,204,339	+				+0.2
1,204,339	+				-1.0
1,204,339	+				+0.0
1,204,339	+				+0.0
1,204,340	-				-2.1
1,204,340	-				-1.2
1,204,382	+				+0.5
1,204,382	+				-1.9
1,204,382	+				-2.0
1,204,382	+				-0.6
1,204,382	+				+1.0
1,204,382	+				-3.6
1,204,382	+				-1.9
1,204,382	+				-1.9
1,204,382	+				-2.3
1,204,382	+				-1.6
1,204,382	+				-1.4
1,204,382	+				-0.0
1,204,382	+				-3.0
1,204,382	+				-2.3
1,204,382	+				-2.4
1,204,382	+				-3.3
1,205,139	-				-0.1