Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF422

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
92,414	+				+0.0
92,414	+				-0.1
92,414	+				+0.7
92,414	+				+0.5
92,415	-				-0.1
92,472	-				+1.9
92,929	+		GFF421	0.48	-0.2
92,929	+		GFF421	0.48	+0.3
93,089	-		GFF421	0.66	-1.4
93,131	-		GFF421	0.71	-0.5
93,368	-				-2.2
93,368	-				-0.1
93,540	+		GFF422	0.14	-0.4
93,574	-		GFF422	0.18	+0.6
94,191	+		GFF422	0.86	+0.3
94,192	-		GFF422	0.86	+1.9
94,538	+		GFF423	0.21	-0.6
94,539	-		GFF423	0.21	-0.2
95,084	+		GFF423	0.73	+0.6
95,193	-		GFF423	0.84	-0.3
95,279	+				-0.2
95,280	-				+0.3
95,280	-				+1.1